Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 AC005252.3-201ENST00000623855 2258 ntBASIC13.38□□□□□ -0.27
CCDC107Q8WV48 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 UXT-AS1-201ENST00000590504 1525 ntBASIC13.38□□□□□ -0.27
CCDC107Q8WV48 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 AL691432.1-201ENST00000596308 1422 ntBASIC13.38□□□□□ -0.27
CCDC107Q8WV48 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.38□□□□□ -0.27
CCDC107Q8WV48 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 BNIP3P1-202ENST00000550043 1585 ntBASIC13.37□□□□□ -0.27
CCDC107Q8WV48 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 AC009090.5-201ENST00000624886 2285 ntBASIC13.37□□□□□ -0.27
CCDC107Q8WV48 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 AC127383.1-201ENST00000444697 1800 ntBASIC13.37□□□□□ -0.27
CCDC107Q8WV48 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 RN7SL589P-201ENST00000481268 310 ntBASIC13.37□□□□□ -0.27
CCDC107Q8WV48 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 AC243562.1-201ENST00000560672 389 ntBASIC13.37□□□□□ -0.27
CCDC107Q8WV48 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC107Q8WV48 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.36□□□□□ -0.27
CCDC107Q8WV48 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 YBX2P1-201ENST00000394192 760 ntBASIC13.36□□□□□ -0.27
CCDC107Q8WV48 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 SPCS2P4-201ENST00000436160 681 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms