Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SIX5Q8N196 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.75■□□□□ 0.11
SIX5Q8N196 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.75■□□□□ 0.11
SIX5Q8N196 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
SIX5Q8N196 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
SIX5Q8N196 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
SIX5Q8N196 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.75■□□□□ 0.11
SIX5Q8N196 PPY2P-201ENST00000582808 702 ntBASIC15.75■□□□□ 0.11
SIX5Q8N196 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SIX5Q8N196 AL133499.1-201ENST00000596207 608 ntBASIC15.75■□□□□ 0.11
SIX5Q8N196 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SIX5Q8N196 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SIX5Q8N196 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.75■□□□□ 0.11
SIX5Q8N196 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.75■□□□□ 0.11
SIX5Q8N196 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
SIX5Q8N196 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.75■□□□□ 0.11
SIX5Q8N196 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SIX5Q8N196 AC078925.2-201ENST00000624013 1973 ntBASIC15.75■□□□□ 0.11
SIX5Q8N196 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.75■□□□□ 0.11
SIX5Q8N196 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.75■□□□□ 0.11
SIX5Q8N196 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
SIX5Q8N196 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
SIX5Q8N196 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 AC006480.2-201ENST00000609770 1337 ntBASIC15.74■□□□□ 0.11
SIX5Q8N196 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.74■□□□□ 0.11
SIX5Q8N196 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.74■□□□□ 0.11
SIX5Q8N196 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.74■□□□□ 0.11
SIX5Q8N196 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SIX5Q8N196 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
SIX5Q8N196 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.74■□□□□ 0.11
SIX5Q8N196 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.74■□□□□ 0.11
SIX5Q8N196 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.74■□□□□ 0.11
SIX5Q8N196 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.74■□□□□ 0.11
SIX5Q8N196 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 AC005740.2-201ENST00000511085 419 ntBASIC15.74■□□□□ 0.11
SIX5Q8N196 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.74■□□□□ 0.11
SIX5Q8N196 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.74■□□□□ 0.11
SIX5Q8N196 AC005730.2-201ENST00000564549 1184 ntBASIC15.74■□□□□ 0.11
SIX5Q8N196 ENPP7P14-201ENST00000621765 1040 ntBASIC15.74■□□□□ 0.11
SIX5Q8N196 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.74■□□□□ 0.11
SIX5Q8N196 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
SIX5Q8N196 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.74■□□□□ 0.11
SIX5Q8N196 AC148477.4-201ENST00000613430 1793 ntBASIC15.74■□□□□ 0.11
SIX5Q8N196 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
SIX5Q8N196 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.74■□□□□ 0.11
SIX5Q8N196 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.74■□□□□ 0.11
SIX5Q8N196 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.74■□□□□ 0.11
SIX5Q8N196 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
SIX5Q8N196 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SIX5Q8N196 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIX5Q8N196 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SIX5Q8N196 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SIX5Q8N196 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.73■□□□□ 0.11
SIX5Q8N196 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 AC068587.6-202ENST00000641839 5619 ntBASIC15.73■□□□□ 0.11
SIX5Q8N196 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
SIX5Q8N196 LINC02199-201ENST00000506655 2702 ntBASIC15.73■□□□□ 0.11
SIX5Q8N196 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.73■□□□□ 0.11
SIX5Q8N196 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.73■□□□□ 0.11
SIX5Q8N196 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.73■□□□□ 0.11
SIX5Q8N196 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.73■□□□□ 0.11
SIX5Q8N196 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.73■□□□□ 0.11
SIX5Q8N196 NUP210P1-202ENST00000504322 710 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms