Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 AGAP7P-201ENST00000582299 2062 ntBASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 AGAP14-201ENST00000624701 2060 ntBASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 AL158070.2-201ENST00000623713 1621 ntBASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 AC093525.8-201ENST00000624099 1342 ntBASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 TCAF2P1-201ENST00000291129 2421 ntBASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 NFIC-211ENST00000641145 8399 ntBASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SCUBE3Q8IX30 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SCUBE3Q8IX30 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SCUBE3Q8IX30 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.14■□□□□ 0.18
SCUBE3Q8IX30 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
SCUBE3Q8IX30 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SCUBE3Q8IX30 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 REXO1L2P-201ENST00000425429 2069 ntBASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 AC005252.2-201ENST00000624630 1141 ntBASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 AC012508.2-201ENST00000567613 1472 ntBASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.14■□□□□ 0.17
SCUBE3Q8IX30 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 AL157414.3-201ENST00000624276 1954 ntBASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms