Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 LINC00554-201ENST00000564841 3011 ntBASIC16.55■□□□□ 0.24
HERC6Q8IVU3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 AC011742.3-201ENST00000439053 820 ntBASIC16.55■□□□□ 0.24
HERC6Q8IVU3 HIST2H2BB-201ENST00000449108 381 ntBASIC16.55■□□□□ 0.24
HERC6Q8IVU3 NUP210P1-202ENST00000504322 710 ntBASIC16.55■□□□□ 0.24
HERC6Q8IVU3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
HERC6Q8IVU3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 AC132872.4-202ENST00000622924 2756 ntBASIC16.54■□□□□ 0.24
HERC6Q8IVU3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 AC008267.1-201ENST00000474858 1069 ntBASIC16.54■□□□□ 0.24
HERC6Q8IVU3 AC021723.1-201ENST00000486306 515 ntBASIC16.54■□□□□ 0.24
HERC6Q8IVU3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 CYP2T1P-202ENST00000641596 2535 ntBASIC16.54■□□□□ 0.24
HERC6Q8IVU3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC6Q8IVU3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 KRT8P14-201ENST00000414254 1442 ntBASIC16.53■□□□□ 0.24
HERC6Q8IVU3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 KRT8P29-201ENST00000420409 1371 ntBASIC16.53■□□□□ 0.24
HERC6Q8IVU3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms