Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC50Q8IVM0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 AL079307.3-201ENST00000556114 283 ntBASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC50Q8IVM0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 AL390755.1-201ENST00000623716 2027 ntBASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 CETN4P-206ENST00000642099 2168 ntBASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 AC092865.5-201ENST00000545435 363 ntBASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 MIR6069-201ENST00000620069 79 ntBASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC50Q8IVM0 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms