Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 KRT18P27-201ENST00000427733 1299 ntBASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 ATP5G2P1-201ENST00000433580 426 ntBASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 AP002469.2-201ENST00000531724 424 ntBASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 MIR3909-201ENST00000579518 119 ntBASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 AC138969.3-201ENST00000546612 1459 ntBASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 AC138932.2-201ENST00000548268 1459 ntBASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 AC126755.4-201ENST00000549796 1459 ntBASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LYSMD2Q8IV50 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD2Q8IV50 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD2Q8IV50 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD2Q8IV50 AC023794.5-201ENST00000564380 2157 ntBASIC13.52□□□□□ -0.24
LYSMD2Q8IV50 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD2Q8IV50 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.52□□□□□ -0.24
LYSMD2Q8IV50 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD2Q8IV50 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD2Q8IV50 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.52□□□□□ -0.24
LYSMD2Q8IV50 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD2Q8IV50 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD2Q8IV50 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
LYSMD2Q8IV50 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
LYSMD2Q8IV50 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
LYSMD2Q8IV50 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD2Q8IV50 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 LAGE3P1-201ENST00000425356 484 ntBASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 FAM185BP-201ENST00000443595 716 ntBASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 AC021087.4-201ENST00000563761 564 ntBASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 AL031055.1-201ENST00000606362 631 ntBASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 ACTL9-202ENST00000612068 1252 ntBASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 AC107918.4-202ENST00000641623 219 ntBASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 FAM90A12P-201ENST00000519497 2375 ntBASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 FAM90A24P-201ENST00000520792 2369 ntBASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
LYSMD2Q8IV50 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD2Q8IV50 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms