Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 AC093433.1-201ENST00000458048 571 ntBASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 AP001063.1-201ENST00000568332 529 ntBASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 AC132938.2-201ENST00000579188 680 ntBASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 AL591163.1-201ENST00000641757 987 ntBASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 AL596257.1-201ENST00000641463 2694 ntBASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CBWD2Q8IUF1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 AC006058.4-201ENST00000624016 1670 ntBASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 AC011270.2-201ENST00000624293 2550 ntBASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 MIR5189-201ENST00000577370 114 ntBASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 IGHV3-72-202ENST00000621503 303 ntBASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBWD2Q8IUF1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 AL645937.2-201ENST00000396808 931 ntBASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 AL139094.1-201ENST00000405549 1188 ntBASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 NME2P1-201ENST00000426182 414 ntBASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.62■□□□□ 0.25
CBWD2Q8IUF1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms