Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 RNA5SP416-201ENST00000516838 111 ntBASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 AC106730.1-201ENST00000566722 1090 ntBASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 AC105021.1-202ENST00000570572 669 ntBASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 UXT-AS1-201ENST00000590504 1525 ntBASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 AC074338.1-201ENST00000416825 156 ntBASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 AL450487.1-201ENST00000426799 995 ntBASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 AC069335.1-201ENST00000489972 472 ntBASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 AC152010.1-201ENST00000415779 2006 ntBASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRTM1Q86UE6 AC092135.3-201ENST00000624151 1846 ntBASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms