Protein–RNA interactions for Protein: Q76G19

PDZD4, PDZ domain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4Q76G19 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDZD4Q76G19 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PDZD4Q76G19 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDZD4Q76G19 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.32■□□□□ 0.2
PDZD4Q76G19 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDZD4Q76G19 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.32■□□□□ 0.2
PDZD4Q76G19 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDZD4Q76G19 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDZD4Q76G19 YBX1P6-201ENST00000442962 1002 ntBASIC16.32■□□□□ 0.2
PDZD4Q76G19 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.32■□□□□ 0.2
PDZD4Q76G19 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDZD4Q76G19 AC022137.2-201ENST00000503482 481 ntBASIC16.32■□□□□ 0.2
PDZD4Q76G19 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.32■□□□□ 0.2
PDZD4Q76G19 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.32■□□□□ 0.2
PDZD4Q76G19 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.32■□□□□ 0.2
PDZD4Q76G19 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.32■□□□□ 0.2
PDZD4Q76G19 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.32■□□□□ 0.2
PDZD4Q76G19 AC244669.2-201ENST00000612320 853 ntBASIC16.32■□□□□ 0.2
PDZD4Q76G19 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDZD4Q76G19 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDZD4Q76G19 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDZD4Q76G19 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDZD4Q76G19 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDZD4Q76G19 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDZD4Q76G19 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDZD4Q76G19 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 KRT90P-201ENST00000549264 1064 ntBASIC16.31■□□□□ 0.2
PDZD4Q76G19 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 AC015910.1-201ENST00000579400 975 ntBASIC16.31■□□□□ 0.2
PDZD4Q76G19 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.31■□□□□ 0.2
PDZD4Q76G19 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDZD4Q76G19 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
PDZD4Q76G19 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDZD4Q76G19 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.3■□□□□ 0.2
PDZD4Q76G19 AC105250.1-201ENST00000509378 2057 ntBASIC16.3■□□□□ 0.2
PDZD4Q76G19 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDZD4Q76G19 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDZD4Q76G19 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDZD4Q76G19 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDZD4Q76G19 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDZD4Q76G19 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.3■□□□□ 0.2
PDZD4Q76G19 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDZD4Q76G19 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDZD4Q76G19 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.3■□□□□ 0.2
PDZD4Q76G19 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.3■□□□□ 0.2
PDZD4Q76G19 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDZD4Q76G19 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.3■□□□□ 0.2
PDZD4Q76G19 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.3■□□□□ 0.2
PDZD4Q76G19 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.3■□□□□ 0.2
PDZD4Q76G19 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDZD4Q76G19 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDZD4Q76G19 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDZD4Q76G19 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.3■□□□□ 0.2
PDZD4Q76G19 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.3■□□□□ 0.2
PDZD4Q76G19 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.3■□□□□ 0.2
PDZD4Q76G19 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.3■□□□□ 0.2
PDZD4Q76G19 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDZD4Q76G19 AC010328.2-201ENST00000597698 1111 ntBASIC16.3■□□□□ 0.2
PDZD4Q76G19 RHOXF1P1-202ENST00000635473 501 ntBASIC16.3■□□□□ 0.2
PDZD4Q76G19 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDZD4Q76G19 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDZD4Q76G19 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDZD4Q76G19 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDZD4Q76G19 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.3■□□□□ 0.2
PDZD4Q76G19 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms