Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 TIMM17BP1-201ENST00000545713 516 ntBASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 AC148477.4-201ENST00000613430 1793 ntBASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NHLRC1Q6VVB1 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 AC005840.4-201ENST00000541242 2494 ntBASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 GHSR-202ENST00000427970 912 ntBASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 AC093214.1-201ENST00000511688 1107 ntBASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 CLK3P2-201ENST00000427566 1453 ntBASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NHLRC1Q6VVB1 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
NHLRC1Q6VVB1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
NHLRC1Q6VVB1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
NHLRC1Q6VVB1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
NHLRC1Q6VVB1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.19
NHLRC1Q6VVB1 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NHLRC1Q6VVB1 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
NHLRC1Q6VVB1 CICP11-201ENST00000434745 2827 ntBASIC13.83□□□□□ -0.19
NHLRC1Q6VVB1 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NHLRC1Q6VVB1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NHLRC1Q6VVB1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.83□□□□□ -0.2
NHLRC1Q6VVB1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NHLRC1Q6VVB1 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NHLRC1Q6VVB1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NHLRC1Q6VVB1 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NHLRC1Q6VVB1 CICP14-201ENST00000629111 2732 ntBASIC13.83□□□□□ -0.2
NHLRC1Q6VVB1 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NHLRC1Q6VVB1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms