Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.21■□□□□ 0.51
CTR9Q6PD62 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTR9Q6PD62 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTR9Q6PD62 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CTR9Q6PD62 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTR9Q6PD62 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTR9Q6PD62 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.21■□□□□ 0.51
CTR9Q6PD62 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.21■□□□□ 0.51
CTR9Q6PD62 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.21■□□□□ 0.51
CTR9Q6PD62 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CTR9Q6PD62 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CTR9Q6PD62 MIR6752-201ENST00000618442 71 ntBASIC18.21■□□□□ 0.51
CTR9Q6PD62 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.21■□□□□ 0.51
CTR9Q6PD62 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTR9Q6PD62 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CTR9Q6PD62 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTR9Q6PD62 C18orf15-201ENST00000623680 2534 ntBASIC18.21■□□□□ 0.51
CTR9Q6PD62 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
CTR9Q6PD62 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CTR9Q6PD62 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.21■□□□□ 0.5
CTR9Q6PD62 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CTR9Q6PD62 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTR9Q6PD62 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTR9Q6PD62 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTR9Q6PD62 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTR9Q6PD62 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTR9Q6PD62 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTR9Q6PD62 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 GHSR-202ENST00000427970 912 ntBASIC18.2■□□□□ 0.5
CTR9Q6PD62 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTR9Q6PD62 AC007274.1-201ENST00000439805 662 ntBASIC18.2■□□□□ 0.5
CTR9Q6PD62 KRT223P-202ENST00000449164 1292 ntBASIC18.2■□□□□ 0.5
CTR9Q6PD62 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTR9Q6PD62 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 KRT90P-201ENST00000549264 1064 ntBASIC18.2■□□□□ 0.5
CTR9Q6PD62 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 AC133552.6-201ENST00000613406 534 ntBASIC18.2■□□□□ 0.5
CTR9Q6PD62 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTR9Q6PD62 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTR9Q6PD62 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTR9Q6PD62 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTR9Q6PD62 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTR9Q6PD62 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.2■□□□□ 0.5
CTR9Q6PD62 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 CNN2P8-201ENST00000421872 913 ntBASIC18.19■□□□□ 0.5
CTR9Q6PD62 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.19■□□□□ 0.5
CTR9Q6PD62 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.19■□□□□ 0.5
CTR9Q6PD62 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CTR9Q6PD62 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTR9Q6PD62 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms