Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 SPCS2P4-201ENST00000436160 681 ntBASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 SPDYE11-202ENST00000450699 704 ntBASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 AL662844.1-201ENST00000546340 181 ntBASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 LINC01225-203ENST00000563550 1244 ntBASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 SPDYE9P-201ENST00000570642 692 ntBASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 SPDYE10P-202ENST00000612005 668 ntBASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 SPDYE8P-202ENST00000612377 668 ntBASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 AC092865.6-201ENST00000642101 219 ntBASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 REXO1L4P-201ENST00000605109 1937 ntBASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 LBH-204ENST00000406087 559 ntTSL 4 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 AC138969.3-201ENST00000546612 1459 ntBASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 AC138932.2-201ENST00000548268 1459 ntBASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 AC126755.4-201ENST00000549796 1459 ntBASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 AC092135.3-201ENST00000624151 1846 ntBASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms