Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RNFT1Q5M7Z0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNFT1Q5M7Z0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNFT1Q5M7Z0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
RNFT1Q5M7Z0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNFT1Q5M7Z0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 FAM8A4P-201ENST00000435433 1213 ntBASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 AL023775.1-201ENST00000454907 1746 ntBASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 KRT8P13-201ENST00000463294 1010 ntBASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNFT1Q5M7Z0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 AC018735.1-201ENST00000437208 1502 ntBASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 AL139099.5-201ENST00000635274 300 ntBASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 AC055811.4-201ENST00000624039 1754 ntBASIC13.76□□□□□ -0.21
RNFT1Q5M7Z0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms