Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AP001582.1-201ENST00000525856 295 ntBASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 AC133539.2-201ENST00000604757 467 ntBASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 AC005252.2-201ENST00000624630 1141 ntBASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 LILRP1-201ENST00000444199 1370 ntBASIC16.13■□□□□ 0.17
PTPN20Q4JDL3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 BX539320.1-201ENST00000623759 877 ntBASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 PRSS30P-206ENST00000641773 873 ntBASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 CICP23-201ENST00000605013 2741 ntBASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 AC013726.1-201ENST00000563747 2285 ntBASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.12■□□□□ 0.17
PTPN20Q4JDL3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 FGD5P1-202ENST00000614866 2498 ntBASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 RNU1-114P-201ENST00000365297 166 ntBASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 AL645937.2-201ENST00000396808 931 ntBASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 CLUHP6-201ENST00000580789 941 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms