Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.62■□□□□ 0.25
CDC42EP1Q00587 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42EP1Q00587 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42EP1Q00587 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42EP1Q00587 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42EP1Q00587 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.62■□□□□ 0.25
CDC42EP1Q00587 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42EP1Q00587 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42EP1Q00587 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CDC42EP1Q00587 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 POM121L10P-201ENST00000436994 1285 ntBASIC16.61■□□□□ 0.25
CDC42EP1Q00587 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 KRT8P13-201ENST00000463294 1010 ntBASIC16.61■□□□□ 0.25
CDC42EP1Q00587 RPSAP36-202ENST00000494591 1261 ntBASIC16.61■□□□□ 0.25
CDC42EP1Q00587 AL391280.1-201ENST00000506969 1062 ntBASIC16.61■□□□□ 0.25
CDC42EP1Q00587 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 PPY2P-201ENST00000582808 702 ntBASIC16.61■□□□□ 0.25
CDC42EP1Q00587 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 KRT8P44-201ENST00000441609 1350 ntBASIC16.61■□□□□ 0.25
CDC42EP1Q00587 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CDC42EP1Q00587 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 AL023775.1-201ENST00000454907 1746 ntBASIC16.6■□□□□ 0.25
CDC42EP1Q00587 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 AC004898.1-201ENST00000451057 766 ntBASIC16.6■□□□□ 0.25
CDC42EP1Q00587 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 AP001258.2-201ENST00000529891 490 ntBASIC16.6■□□□□ 0.25
CDC42EP1Q00587 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 AP006547.1-201ENST00000563435 692 ntBASIC16.6■□□□□ 0.25
CDC42EP1Q00587 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 FKBP4P6-201ENST00000457486 1332 ntBASIC16.6■□□□□ 0.25
CDC42EP1Q00587 AL137783.1-201ENST00000623494 1896 ntBASIC16.6■□□□□ 0.25
CDC42EP1Q00587 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 AL139384.1-201ENST00000612143 3047 ntBASIC16.6■□□□□ 0.25
CDC42EP1Q00587 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42EP1Q00587 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms