Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D3P61077 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D3P61077 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D3P61077 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11□□□□□ -0.65
UBE2D3P61077 COL6A4P2-202ENST00000504443 2753 ntBASIC11□□□□□ -0.65
UBE2D3P61077 AC027601.5-201ENST00000624065 2482 ntBASIC11□□□□□ -0.65
UBE2D3P61077 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D3P61077 AC136759.1-202ENST00000530858 2194 ntBASIC11□□□□□ -0.65
UBE2D3P61077 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
UBE2D3P61077 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
UBE2D3P61077 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
UBE2D3P61077 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11□□□□□ -0.65
UBE2D3P61077 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC11□□□□□ -0.65
UBE2D3P61077 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC11□□□□□ -0.65
UBE2D3P61077 HIST3H2BA-201ENST00000436555 524 ntBASIC11□□□□□ -0.65
UBE2D3P61077 RBPMS2P1-201ENST00000437762 623 ntBASIC11□□□□□ -0.65
UBE2D3P61077 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D3P61077 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11□□□□□ -0.65
UBE2D3P61077 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11□□□□□ -0.65
UBE2D3P61077 AC093520.2-201ENST00000561830 333 ntBASIC11□□□□□ -0.65
UBE2D3P61077 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11□□□□□ -0.65
UBE2D3P61077 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11□□□□□ -0.65
UBE2D3P61077 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D3P61077 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC11□□□□□ -0.65
UBE2D3P61077 AL671883.3-201ENST00000603274 991 ntBASIC11□□□□□ -0.65
UBE2D3P61077 AC004835.2-201ENST00000603762 682 ntBASIC11□□□□□ -0.65
UBE2D3P61077 RN7SL828P-201ENST00000607615 303 ntBASIC11□□□□□ -0.65
UBE2D3P61077 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
UBE2D3P61077 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
UBE2D3P61077 KRT8P12-202ENST00000472924 1397 ntBASIC11□□□□□ -0.65
UBE2D3P61077 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D3P61077 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D3P61077 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D3P61077 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
UBE2D3P61077 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
UBE2D3P61077 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D3P61077 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D3P61077 IMPDH1P4-201ENST00000445028 1534 ntBASIC10.99□□□□□ -0.65
UBE2D3P61077 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D3P61077 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D3P61077 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC10.99□□□□□ -0.65
UBE2D3P61077 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D3P61077 AC084364.1-201ENST00000551967 1556 ntBASIC10.99□□□□□ -0.65
UBE2D3P61077 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC10.99□□□□□ -0.65
UBE2D3P61077 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
UBE2D3P61077 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
UBE2D3P61077 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
UBE2D3P61077 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D3P61077 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.99□□□□□ -0.65
UBE2D3P61077 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D3P61077 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC10.99□□□□□ -0.65
UBE2D3P61077 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D3P61077 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D3P61077 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC10.99□□□□□ -0.65
UBE2D3P61077 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
UBE2D3P61077 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC10.99□□□□□ -0.65
UBE2D3P61077 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC10.99□□□□□ -0.65
UBE2D3P61077 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D3P61077 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC10.99□□□□□ -0.65
UBE2D3P61077 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D3P61077 COA5-202ENST00000409997 557 ntTSL 4 BASIC10.99□□□□□ -0.65
UBE2D3P61077 GPS2P2-201ENST00000430745 888 ntBASIC10.99□□□□□ -0.65
UBE2D3P61077 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC10.99□□□□□ -0.65
UBE2D3P61077 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC10.99□□□□□ -0.65
UBE2D3P61077 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D3P61077 SPDYE14P-201ENST00000442619 822 ntBASIC10.99□□□□□ -0.65
UBE2D3P61077 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D3P61077 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.99□□□□□ -0.65
UBE2D3P61077 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC10.99□□□□□ -0.65
UBE2D3P61077 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC10.99□□□□□ -0.65
UBE2D3P61077 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
UBE2D3P61077 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.99□□□□□ -0.65
UBE2D3P61077 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms