Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.6□□□□□ -0.39
SPCS3P61009 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.6□□□□□ -0.39
SPCS3P61009 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SPCS3P61009 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SPCS3P61009 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SPCS3P61009 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SPCS3P61009 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SPCS3P61009 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SPCS3P61009 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.59□□□□□ -0.39
SPCS3P61009 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.59□□□□□ -0.39
SPCS3P61009 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.59□□□□□ -0.39
SPCS3P61009 KRT8P23-201ENST00000560090 1207 ntBASIC12.59□□□□□ -0.39
SPCS3P61009 AP000842.3-202ENST00000569238 1080 ntBASIC12.59□□□□□ -0.39
SPCS3P61009 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.59□□□□□ -0.39
SPCS3P61009 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SPCS3P61009 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.59□□□□□ -0.39
SPCS3P61009 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SPCS3P61009 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
SPCS3P61009 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
SPCS3P61009 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPCS3P61009 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SPCS3P61009 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SPCS3P61009 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.59□□□□□ -0.39
SPCS3P61009 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SPCS3P61009 BEND3P1-201ENST00000421591 1944 ntBASIC12.58□□□□□ -0.39
SPCS3P61009 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SPCS3P61009 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.58□□□□□ -0.39
SPCS3P61009 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.58□□□□□ -0.4
SPCS3P61009 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SPCS3P61009 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SPCS3P61009 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SPCS3P61009 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SPCS3P61009 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.58□□□□□ -0.4
SPCS3P61009 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.58□□□□□ -0.4
SPCS3P61009 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SPCS3P61009 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.58□□□□□ -0.4
SPCS3P61009 RPL13AP23-201ENST00000480739 586 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms