Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.68□□□□□ -0.06
NR1H2P55055 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.68□□□□□ -0.06
NR1H2P55055 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NR1H2P55055 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H2P55055 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.67□□□□□ -0.06
NR1H2P55055 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
NR1H2P55055 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.67□□□□□ -0.06
NR1H2P55055 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 AC131009.4-201ENST00000624048 1740 ntBASIC14.67□□□□□ -0.06
NR1H2P55055 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NR1H2P55055 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
NR1H2P55055 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 AL355306.1-201ENST00000415580 579 ntBASIC14.67□□□□□ -0.06
NR1H2P55055 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.67□□□□□ -0.06
NR1H2P55055 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.67□□□□□ -0.06
NR1H2P55055 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
NR1H2P55055 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.67□□□□□ -0.06
NR1H2P55055 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.67□□□□□ -0.06
NR1H2P55055 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.67□□□□□ -0.06
NR1H2P55055 AC092364.2-202ENST00000597012 1073 ntBASIC14.67□□□□□ -0.06
NR1H2P55055 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.67□□□□□ -0.06
NR1H2P55055 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 AC026120.1-201ENST00000611536 926 ntBASIC14.67□□□□□ -0.06
NR1H2P55055 AC093028.1-201ENST00000622998 982 ntBASIC14.67□□□□□ -0.06
NR1H2P55055 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.67□□□□□ -0.06
NR1H2P55055 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
NR1H2P55055 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NR1H2P55055 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.67□□□□□ -0.06
NR1H2P55055 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NR1H2P55055 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.67□□□□□ -0.06
NR1H2P55055 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.67□□□□□ -0.06
NR1H2P55055 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.67□□□□□ -0.06
NR1H2P55055 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H2P55055 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NR1H2P55055 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NR1H2P55055 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
NR1H2P55055 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NR1H2P55055 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NR1H2P55055 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NR1H2P55055 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.66□□□□□ -0.06
NR1H2P55055 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 AL671277.1-201ENST00000429656 993 ntBASIC14.66□□□□□ -0.06
NR1H2P55055 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.66□□□□□ -0.06
NR1H2P55055 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.66□□□□□ -0.06
NR1H2P55055 SPDYE11-202ENST00000450699 704 ntBASIC14.66□□□□□ -0.06
NR1H2P55055 TIMM8BP1-201ENST00000452384 211 ntBASIC14.66□□□□□ -0.06
NR1H2P55055 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
NR1H2P55055 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NR1H2P55055 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.66□□□□□ -0.06
NR1H2P55055 SPDYE9P-201ENST00000570642 692 ntBASIC14.66□□□□□ -0.06
NR1H2P55055 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
NR1H2P55055 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 SPDYE10P-202ENST00000612005 668 ntBASIC14.66□□□□□ -0.06
NR1H2P55055 SPDYE8P-202ENST00000612377 668 ntBASIC14.66□□□□□ -0.06
NR1H2P55055 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.66□□□□□ -0.06
NR1H2P55055 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.66□□□□□ -0.06
NR1H2P55055 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 AC089987.1-201ENST00000551654 2209 ntBASIC14.66□□□□□ -0.06
NR1H2P55055 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.66□□□□□ -0.06
NR1H2P55055 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms