Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
EPHB4P54760 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
EPHB4P54760 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
EPHB4P54760 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.29■□□□□ 0.36
EPHB4P54760 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.29■□□□□ 0.36
EPHB4P54760 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHB4P54760 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.29■□□□□ 0.36
EPHB4P54760 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHB4P54760 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHB4P54760 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHB4P54760 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.29■□□□□ 0.36
EPHB4P54760 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHB4P54760 AC091046.1-201ENST00000331871 207 ntBASIC17.29■□□□□ 0.36
EPHB4P54760 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHB4P54760 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.29■□□□□ 0.36
EPHB4P54760 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.29■□□□□ 0.36
EPHB4P54760 AC023310.1-201ENST00000554836 735 ntBASIC17.29■□□□□ 0.36
EPHB4P54760 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.29■□□□□ 0.36
EPHB4P54760 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.29■□□□□ 0.36
EPHB4P54760 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.29■□□□□ 0.36
EPHB4P54760 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
EPHB4P54760 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.29■□□□□ 0.36
EPHB4P54760 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHB4P54760 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.29■□□□□ 0.36
EPHB4P54760 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHB4P54760 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.29■□□□□ 0.36
EPHB4P54760 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHB4P54760 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
EPHB4P54760 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.29■□□□□ 0.36
EPHB4P54760 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EPHB4P54760 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.29■□□□□ 0.36
EPHB4P54760 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.29■□□□□ 0.36
EPHB4P54760 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.29■□□□□ 0.36
EPHB4P54760 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EPHB4P54760 PRAL-201ENST00000624952 3286 ntBASIC17.29■□□□□ 0.36
EPHB4P54760 NORAD-201ENST00000565493 5339 ntBASIC17.28■□□□□ 0.36
EPHB4P54760 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.28■□□□□ 0.36
EPHB4P54760 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
EPHB4P54760 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.28■□□□□ 0.36
EPHB4P54760 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
EPHB4P54760 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.28■□□□□ 0.36
EPHB4P54760 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.28■□□□□ 0.36
EPHB4P54760 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.28■□□□□ 0.36
EPHB4P54760 HINT2P1-201ENST00000419438 481 ntBASIC17.28■□□□□ 0.36
EPHB4P54760 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.28■□□□□ 0.36
EPHB4P54760 RPL13AP25-201ENST00000484130 612 ntBASIC17.28■□□□□ 0.36
EPHB4P54760 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
EPHB4P54760 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
EPHB4P54760 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.28■□□□□ 0.36
EPHB4P54760 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.28■□□□□ 0.36
EPHB4P54760 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
EPHB4P54760 REXO1L8P-201ENST00000604378 1897 ntBASIC17.28■□□□□ 0.36
EPHB4P54760 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.28■□□□□ 0.36
EPHB4P54760 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.28■□□□□ 0.36
EPHB4P54760 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.28■□□□□ 0.36
EPHB4P54760 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
EPHB4P54760 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EPHB4P54760 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.27■□□□□ 0.36
EPHB4P54760 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EPHB4P54760 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EPHB4P54760 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.27■□□□□ 0.36
EPHB4P54760 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EPHB4P54760 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.27■□□□□ 0.36
EPHB4P54760 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
EPHB4P54760 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EPHB4P54760 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EPHB4P54760 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
EPHB4P54760 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.27■□□□□ 0.36
EPHB4P54760 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.27■□□□□ 0.36
EPHB4P54760 AC138028.6-201ENST00000616106 1482 ntBASIC17.27■□□□□ 0.36
EPHB4P54760 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
EPHB4P54760 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.27■□□□□ 0.36
EPHB4P54760 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EPHB4P54760 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
EPHB4P54760 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.27■□□□□ 0.36
EPHB4P54760 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.27■□□□□ 0.36
EPHB4P54760 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EPHB4P54760 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EPHB4P54760 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
EPHB4P54760 AC004987.2-201ENST00000395959 1148 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms