Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
SRP9P49458 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SRP9P49458 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.72□□□□□ -0.21
SRP9P49458 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.72□□□□□ -0.21
SRP9P49458 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.72□□□□□ -0.21
SRP9P49458 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.72□□□□□ -0.21
SRP9P49458 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.72□□□□□ -0.21
SRP9P49458 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.72□□□□□ -0.21
SRP9P49458 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.72□□□□□ -0.21
SRP9P49458 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.72□□□□□ -0.21
SRP9P49458 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.72□□□□□ -0.21
SRP9P49458 AC243562.2-201ENST00000561247 970 ntBASIC13.72□□□□□ -0.21
SRP9P49458 MIR4453-201ENST00000584019 89 ntBASIC13.72□□□□□ -0.21
SRP9P49458 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.72□□□□□ -0.21
SRP9P49458 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.72□□□□□ -0.21
SRP9P49458 AC093028.1-201ENST00000622998 982 ntBASIC13.72□□□□□ -0.21
SRP9P49458 Z92544.3-201ENST00000624747 417 ntBASIC13.72□□□□□ -0.21
SRP9P49458 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.72□□□□□ -0.21
SRP9P49458 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.72□□□□□ -0.21
SRP9P49458 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SRP9P49458 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.72□□□□□ -0.21
SRP9P49458 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SRP9P49458 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.72□□□□□ -0.21
SRP9P49458 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.72□□□□□ -0.21
SRP9P49458 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.72□□□□□ -0.21
SRP9P49458 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SRP9P49458 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.71□□□□□ -0.21
SRP9P49458 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.71□□□□□ -0.21
SRP9P49458 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.71□□□□□ -0.21
SRP9P49458 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SRP9P49458 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 TUBB3P1-201ENST00000405796 1332 ntBASIC13.71□□□□□ -0.21
SRP9P49458 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SRP9P49458 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
SRP9P49458 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.71□□□□□ -0.21
SRP9P49458 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.71□□□□□ -0.21
SRP9P49458 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.71□□□□□ -0.21
SRP9P49458 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.71□□□□□ -0.21
SRP9P49458 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.71□□□□□ -0.21
SRP9P49458 AL645939.2-201ENST00000427340 991 ntBASIC13.71□□□□□ -0.21
SRP9P49458 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 AC125807.1-201ENST00000483097 614 ntBASIC13.71□□□□□ -0.21
SRP9P49458 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.71□□□□□ -0.21
SRP9P49458 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.71□□□□□ -0.21
SRP9P49458 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.71□□□□□ -0.21
SRP9P49458 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
SRP9P49458 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.71□□□□□ -0.21
SRP9P49458 AC015911.4-201ENST00000588022 1070 ntBASIC13.71□□□□□ -0.21
SRP9P49458 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.71□□□□□ -0.21
SRP9P49458 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
SRP9P49458 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 AP001282.1-201ENST00000531301 1499 ntBASIC13.71□□□□□ -0.21
SRP9P49458 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.71□□□□□ -0.21
SRP9P49458 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SRP9P49458 AC027601.5-201ENST00000624065 2482 ntBASIC13.71□□□□□ -0.21
SRP9P49458 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SRP9P49458 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms