Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.03□□□□□ -0.16
CENPAP49450 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.03□□□□□ -0.16
CENPAP49450 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.03□□□□□ -0.16
CENPAP49450 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CENPAP49450 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.03□□□□□ -0.16
CENPAP49450 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.03□□□□□ -0.16
CENPAP49450 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.03□□□□□ -0.16
CENPAP49450 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
CENPAP49450 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.03□□□□□ -0.16
CENPAP49450 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.03□□□□□ -0.16
CENPAP49450 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.03□□□□□ -0.16
CENPAP49450 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.03□□□□□ -0.16
CENPAP49450 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CENPAP49450 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.03□□□□□ -0.16
CENPAP49450 MIR6080-201ENST00000617359 66 ntBASIC14.03□□□□□ -0.16
CENPAP49450 AL513210.1-201ENST00000629608 234 ntBASIC14.03□□□□□ -0.16
CENPAP49450 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CENPAP49450 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.03□□□□□ -0.16
CENPAP49450 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CENPAP49450 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 AC148477.4-201ENST00000613430 1793 ntBASIC14.03□□□□□ -0.16
CENPAP49450 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CENPAP49450 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.03□□□□□ -0.16
CENPAP49450 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.03□□□□□ -0.16
CENPAP49450 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.03□□□□□ -0.16
CENPAP49450 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.03□□□□□ -0.16
CENPAP49450 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CENPAP49450 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CENPAP49450 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CENPAP49450 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CENPAP49450 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.02□□□□□ -0.16
CENPAP49450 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CENPAP49450 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
CENPAP49450 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CENPAP49450 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CENPAP49450 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CENPAP49450 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CENPAP49450 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CENPAP49450 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CENPAP49450 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CENPAP49450 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.02□□□□□ -0.16
CENPAP49450 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.02□□□□□ -0.16
CENPAP49450 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CENPAP49450 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CENPAP49450 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.02□□□□□ -0.16
CENPAP49450 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CENPAP49450 AL607033.1-201ENST00000623900 1599 ntBASIC14.02□□□□□ -0.16
CENPAP49450 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.02□□□□□ -0.16
CENPAP49450 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CENPAP49450 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CENPAP49450 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.02□□□□□ -0.17
CENPAP49450 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.02□□□□□ -0.17
CENPAP49450 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.02□□□□□ -0.17
CENPAP49450 AC211486.1-202ENST00000416371 468 ntBASIC14.02□□□□□ -0.17
CENPAP49450 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.02□□□□□ -0.17
CENPAP49450 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.02□□□□□ -0.17
CENPAP49450 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CENPAP49450 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.02□□□□□ -0.17
CENPAP49450 AC211476.1-201ENST00000503899 468 ntBASIC14.02□□□□□ -0.17
CENPAP49450 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.02□□□□□ -0.17
CENPAP49450 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.02□□□□□ -0.17
CENPAP49450 HNRNPUP1-201ENST00000554987 333 ntBASIC14.02□□□□□ -0.17
CENPAP49450 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.02□□□□□ -0.17
CENPAP49450 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
CENPAP49450 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CENPAP49450 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.02□□□□□ -0.17
CENPAP49450 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CENPAP49450 AC097359.3-201ENST00000603982 1210 ntBASIC14.02□□□□□ -0.17
CENPAP49450 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CENPAP49450 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CENPAP49450 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CENPAP49450 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
CENPAP49450 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CENPAP49450 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
CENPAP49450 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.02□□□□□ -0.17
CENPAP49450 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.02□□□□□ -0.17
CENPAP49450 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CENPAP49450 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CENPAP49450 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms