Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 GHSR-202ENST00000427970 912 ntBASIC16.25■□□□□ 0.19
BRCC3P46736 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
BRCC3P46736 FAM8A4P-201ENST00000435433 1213 ntBASIC16.25■□□□□ 0.19
BRCC3P46736 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.25■□□□□ 0.19
BRCC3P46736 Z93015.1-201ENST00000451718 390 ntBASIC16.25■□□□□ 0.19
BRCC3P46736 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BRCC3P46736 C2orf69P2-201ENST00000562032 1123 ntBASIC16.25■□□□□ 0.19
BRCC3P46736 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.25■□□□□ 0.19
BRCC3P46736 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.25■□□□□ 0.19
BRCC3P46736 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.25■□□□□ 0.19
BRCC3P46736 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.25■□□□□ 0.19
BRCC3P46736 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
BRCC3P46736 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
BRCC3P46736 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
BRCC3P46736 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BRCC3P46736 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.25■□□□□ 0.19
BRCC3P46736 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BRCC3P46736 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
BRCC3P46736 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.25■□□□□ 0.19
BRCC3P46736 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.25■□□□□ 0.19
BRCC3P46736 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRCC3P46736 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.24■□□□□ 0.19
BRCC3P46736 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRCC3P46736 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRCC3P46736 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRCC3P46736 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
BRCC3P46736 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
BRCC3P46736 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRCC3P46736 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
BRCC3P46736 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.24■□□□□ 0.19
BRCC3P46736 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
BRCC3P46736 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.24■□□□□ 0.19
BRCC3P46736 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BRCC3P46736 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.24■□□□□ 0.19
BRCC3P46736 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRCC3P46736 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BRCC3P46736 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BRCC3P46736 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRCC3P46736 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
BRCC3P46736 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.24■□□□□ 0.19
BRCC3P46736 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.24■□□□□ 0.19
BRCC3P46736 AC099548.2-209ENST00000480264 625 ntBASIC16.24■□□□□ 0.19
BRCC3P46736 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BRCC3P46736 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
BRCC3P46736 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BRCC3P46736 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.24■□□□□ 0.19
BRCC3P46736 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.24■□□□□ 0.19
BRCC3P46736 AP003171.2-201ENST00000528208 925 ntBASIC16.24■□□□□ 0.19
BRCC3P46736 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.24■□□□□ 0.19
BRCC3P46736 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.24■□□□□ 0.19
BRCC3P46736 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.24■□□□□ 0.19
BRCC3P46736 DUX4L47-201ENST00000566374 394 ntBASIC16.24■□□□□ 0.19
BRCC3P46736 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.24■□□□□ 0.19
BRCC3P46736 AC243960.2-201ENST00000600996 747 ntBASIC16.24■□□□□ 0.19
BRCC3P46736 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.24■□□□□ 0.19
BRCC3P46736 MIR6787-201ENST00000616675 61 ntBASIC16.24■□□□□ 0.19
BRCC3P46736 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRCC3P46736 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRCC3P46736 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
BRCC3P46736 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.24■□□□□ 0.19
BRCC3P46736 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BRCC3P46736 KRT8P44-201ENST00000441609 1350 ntBASIC16.24■□□□□ 0.19
BRCC3P46736 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
BRCC3P46736 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.23■□□□□ 0.19
BRCC3P46736 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.23■□□□□ 0.19
BRCC3P46736 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.23■□□□□ 0.19
BRCC3P46736 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
BRCC3P46736 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.23■□□□□ 0.19
BRCC3P46736 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.23■□□□□ 0.19
BRCC3P46736 AC007969.1-201ENST00000433675 447 ntBASIC16.23■□□□□ 0.19
BRCC3P46736 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.23■□□□□ 0.19
BRCC3P46736 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.23■□□□□ 0.19
BRCC3P46736 AC026434.2-201ENST00000506094 1078 ntBASIC16.23■□□□□ 0.19
BRCC3P46736 AL391280.1-201ENST00000506969 1062 ntBASIC16.23■□□□□ 0.19
BRCC3P46736 ZNF767P-206ENST00000513792 565 ntBASIC16.23■□□□□ 0.19
BRCC3P46736 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.23■□□□□ 0.19
BRCC3P46736 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
BRCC3P46736 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
BRCC3P46736 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
BRCC3P46736 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
BRCC3P46736 OR10B1P-201ENST00000601666 907 ntBASIC16.23■□□□□ 0.19
BRCC3P46736 AL118558.3-201ENST00000607414 1079 ntBASIC16.23■□□□□ 0.19
BRCC3P46736 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.23■□□□□ 0.19
BRCC3P46736 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms