Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX2-1P43699 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NKX2-1P43699 AC092135.3-201ENST00000624151 1846 ntBASIC12.65□□□□□ -0.39
NKX2-1P43699 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
NKX2-1P43699 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
NKX2-1P43699 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
NKX2-1P43699 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.64□□□□□ -0.39
NKX2-1P43699 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
NKX2-1P43699 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
NKX2-1P43699 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
NKX2-1P43699 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
NKX2-1P43699 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
NKX2-1P43699 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
NKX2-1P43699 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.64□□□□□ -0.39
NKX2-1P43699 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.64□□□□□ -0.39
NKX2-1P43699 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
NKX2-1P43699 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 GHSR-202ENST00000427970 912 ntBASIC12.64□□□□□ -0.39
NKX2-1P43699 HNRNPDP1-201ENST00000439535 754 ntBASIC12.64□□□□□ -0.39
NKX2-1P43699 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.64□□□□□ -0.39
NKX2-1P43699 AL139010.1-201ENST00000454878 894 ntBASIC12.64□□□□□ -0.39
NKX2-1P43699 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.64□□□□□ -0.39
NKX2-1P43699 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.64□□□□□ -0.39
NKX2-1P43699 RNA5SP410-201ENST00000516285 106 ntBASIC12.64□□□□□ -0.39
NKX2-1P43699 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.64□□□□□ -0.39
NKX2-1P43699 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.64□□□□□ -0.39
NKX2-1P43699 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.64□□□□□ -0.39
NKX2-1P43699 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.64□□□□□ -0.39
NKX2-1P43699 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.64□□□□□ -0.39
NKX2-1P43699 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.64□□□□□ -0.39
NKX2-1P43699 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.64□□□□□ -0.39
NKX2-1P43699 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.64□□□□□ -0.39
NKX2-1P43699 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.64□□□□□ -0.39
NKX2-1P43699 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
NKX2-1P43699 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.64□□□□□ -0.39
NKX2-1P43699 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.64□□□□□ -0.39
NKX2-1P43699 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX2-1P43699 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
NKX2-1P43699 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
NKX2-1P43699 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
NKX2-1P43699 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.63□□□□□ -0.39
NKX2-1P43699 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 AL137784.3-201ENST00000623858 2288 ntBASIC12.63□□□□□ -0.39
NKX2-1P43699 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.63□□□□□ -0.39
NKX2-1P43699 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
NKX2-1P43699 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
NKX2-1P43699 HCG4B-203ENST00000450128 991 ntBASIC12.63□□□□□ -0.39
NKX2-1P43699 AC092910.1-201ENST00000482027 1129 ntBASIC12.63□□□□□ -0.39
NKX2-1P43699 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.63□□□□□ -0.39
NKX2-1P43699 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.63□□□□□ -0.39
NKX2-1P43699 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.63□□□□□ -0.39
NKX2-1P43699 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
NKX2-1P43699 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
NKX2-1P43699 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
NKX2-1P43699 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.63□□□□□ -0.39
NKX2-1P43699 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.63□□□□□ -0.39
NKX2-1P43699 AP000845.1-201ENST00000581677 2131 ntBASIC12.63□□□□□ -0.39
NKX2-1P43699 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.63□□□□□ -0.39
NKX2-1P43699 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.63□□□□□ -0.39
NKX2-1P43699 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms