Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.45□□□□□ -0.26
GDNFP39905 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
GDNFP39905 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
GDNFP39905 AC113367.3-201ENST00000508316 1912 ntBASIC13.45□□□□□ -0.26
GDNFP39905 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
GDNFP39905 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
GDNFP39905 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
GDNFP39905 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
GDNFP39905 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.45□□□□□ -0.26
GDNFP39905 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.45□□□□□ -0.26
GDNFP39905 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.45□□□□□ -0.26
GDNFP39905 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.45□□□□□ -0.26
GDNFP39905 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.45□□□□□ -0.26
GDNFP39905 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.45□□□□□ -0.26
GDNFP39905 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.45□□□□□ -0.26
GDNFP39905 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
GDNFP39905 AC243562.2-201ENST00000561247 970 ntBASIC13.45□□□□□ -0.26
GDNFP39905 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.45□□□□□ -0.26
GDNFP39905 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.45□□□□□ -0.26
GDNFP39905 AC010327.4-202ENST00000591484 748 ntBASIC13.45□□□□□ -0.26
GDNFP39905 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.45□□□□□ -0.26
GDNFP39905 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
GDNFP39905 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
GDNFP39905 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.45□□□□□ -0.26
GDNFP39905 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GDNFP39905 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.44□□□□□ -0.26
GDNFP39905 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 FOXO1B-201ENST00000504678 1527 ntBASIC13.44□□□□□ -0.26
GDNFP39905 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.44□□□□□ -0.26
GDNFP39905 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
GDNFP39905 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
GDNFP39905 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.44□□□□□ -0.26
GDNFP39905 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.44□□□□□ -0.26
GDNFP39905 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
GDNFP39905 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.44□□□□□ -0.26
GDNFP39905 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.44□□□□□ -0.26
GDNFP39905 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.44□□□□□ -0.26
GDNFP39905 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.44□□□□□ -0.26
GDNFP39905 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.44□□□□□ -0.26
GDNFP39905 AC243562.1-201ENST00000560672 389 ntBASIC13.44□□□□□ -0.26
GDNFP39905 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
GDNFP39905 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.44□□□□□ -0.26
GDNFP39905 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.44□□□□□ -0.26
GDNFP39905 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
GDNFP39905 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
GDNFP39905 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.44□□□□□ -0.26
GDNFP39905 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
GDNFP39905 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
GDNFP39905 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.44□□□□□ -0.26
GDNFP39905 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.44□□□□□ -0.26
GDNFP39905 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.44□□□□□ -0.26
GDNFP39905 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GDNFP39905 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.43□□□□□ -0.26
GDNFP39905 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.43□□□□□ -0.26
GDNFP39905 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
GDNFP39905 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.43□□□□□ -0.26
GDNFP39905 AKAP8P1-201ENST00000434743 1349 ntBASIC13.43□□□□□ -0.26
GDNFP39905 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms