Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.7■□□□□ 0.58
PDE6BP35913 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.7■□□□□ 0.58
PDE6BP35913 AC138696.2-201ENST00000607376 223 ntBASIC18.7■□□□□ 0.58
PDE6BP35913 TBC1D3J-201ENST00000620719 1426 ntBASIC18.7■□□□□ 0.58
PDE6BP35913 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.7■□□□□ 0.58
PDE6BP35913 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PDE6BP35913 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PDE6BP35913 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PDE6BP35913 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.7■□□□□ 0.58
PDE6BP35913 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PDE6BP35913 AL360270.3-201ENST00000609118 1348 ntBASIC18.7■□□□□ 0.58
PDE6BP35913 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.7■□□□□ 0.58
PDE6BP35913 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDE6BP35913 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PDE6BP35913 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.69■□□□□ 0.58
PDE6BP35913 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18.69■□□□□ 0.58
PDE6BP35913 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.69■□□□□ 0.58
PDE6BP35913 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.69■□□□□ 0.58
PDE6BP35913 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PDE6BP35913 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.69■□□□□ 0.58
PDE6BP35913 RPSAP31-201ENST00000416648 895 ntBASIC18.69■□□□□ 0.58
PDE6BP35913 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.69■□□□□ 0.58
PDE6BP35913 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.69■□□□□ 0.58
PDE6BP35913 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.69■□□□□ 0.58
PDE6BP35913 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC18.69■□□□□ 0.58
PDE6BP35913 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.69■□□□□ 0.58
PDE6BP35913 AC008805.1-201ENST00000590892 364 ntBASIC18.69■□□□□ 0.58
PDE6BP35913 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
PDE6BP35913 AL805961.1-201ENST00000642026 753 ntBASIC18.69■□□□□ 0.58
PDE6BP35913 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 INE2-201ENST00000630399 1874 ntBASIC18.69■□□□□ 0.58
PDE6BP35913 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDE6BP35913 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.69■□□□□ 0.58
PDE6BP35913 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6BP35913 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PDE6BP35913 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.68■□□□□ 0.58
PDE6BP35913 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
PDE6BP35913 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PDE6BP35913 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.68■□□□□ 0.58
PDE6BP35913 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 DNAJB1P1-201ENST00000429417 1024 ntBASIC18.68■□□□□ 0.58
PDE6BP35913 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
PDE6BP35913 AC008825.2-201ENST00000603374 718 ntBASIC18.68■□□□□ 0.58
PDE6BP35913 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.68■□□□□ 0.58
PDE6BP35913 AC051619.9-201ENST00000623237 597 ntBASIC18.68■□□□□ 0.58
PDE6BP35913 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.68■□□□□ 0.58
PDE6BP35913 AC009093.2-202ENST00000620513 2079 ntBASIC18.68■□□□□ 0.58
PDE6BP35913 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.68■□□□□ 0.58
PDE6BP35913 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.68■□□□□ 0.58
PDE6BP35913 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.68■□□□□ 0.58
PDE6BP35913 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6BP35913 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC18.68■□□□□ 0.58
PDE6BP35913 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.67■□□□□ 0.58
PDE6BP35913 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PDE6BP35913 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDE6BP35913 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms