Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC17.92■□□□□ 0.46
COL4A5P29400 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A5P29400 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A5P29400 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A5P29400 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A5P29400 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.92■□□□□ 0.46
COL4A5P29400 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A5P29400 AP000845.1-201ENST00000581677 2131 ntBASIC17.92■□□□□ 0.46
COL4A5P29400 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A5P29400 AC007292.2-201ENST00000593524 1812 ntBASIC17.92■□□□□ 0.46
COL4A5P29400 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A5P29400 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COL4A5P29400 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A5P29400 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COL4A5P29400 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.91■□□□□ 0.46
COL4A5P29400 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COL4A5P29400 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 BANF1P3-201ENST00000412556 261 ntBASIC17.91■□□□□ 0.46
COL4A5P29400 TLE1P1-201ENST00000422965 589 ntBASIC17.91■□□□□ 0.46
COL4A5P29400 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.91■□□□□ 0.46
COL4A5P29400 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.91■□□□□ 0.46
COL4A5P29400 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.91■□□□□ 0.46
COL4A5P29400 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.91■□□□□ 0.46
COL4A5P29400 AL157792.1-201ENST00000488281 530 ntBASIC17.91■□□□□ 0.46
COL4A5P29400 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.91■□□□□ 0.46
COL4A5P29400 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.91■□□□□ 0.46
COL4A5P29400 BX088702.1-201ENST00000610784 235 ntBASIC17.91■□□□□ 0.46
COL4A5P29400 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.91■□□□□ 0.46
COL4A5P29400 AC027601.3-201ENST00000622907 509 ntBASIC17.91■□□□□ 0.46
COL4A5P29400 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 AC012508.2-201ENST00000567613 1472 ntBASIC17.91■□□□□ 0.46
COL4A5P29400 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.91■□□□□ 0.46
COL4A5P29400 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COL4A5P29400 AC090616.6-203ENST00000579186 1945 ntBASIC17.91■□□□□ 0.46
COL4A5P29400 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 LILRP1-201ENST00000444199 1370 ntBASIC17.91■□□□□ 0.46
COL4A5P29400 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
COL4A5P29400 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.91■□□□□ 0.46
COL4A5P29400 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A5P29400 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A5P29400 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC17.9■□□□□ 0.46
COL4A5P29400 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC17.9■□□□□ 0.46
COL4A5P29400 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.9■□□□□ 0.46
COL4A5P29400 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.9■□□□□ 0.46
COL4A5P29400 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A5P29400 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.9■□□□□ 0.46
COL4A5P29400 AL022334.2-201ENST00000610000 484 ntBASIC17.9■□□□□ 0.46
COL4A5P29400 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.9■□□□□ 0.46
COL4A5P29400 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
COL4A5P29400 ZBED1P1-201ENST00000502364 1930 ntBASIC17.9■□□□□ 0.46
COL4A5P29400 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.9■□□□□ 0.46
COL4A5P29400 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
COL4A5P29400 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A5P29400 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A5P29400 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A5P29400 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A5P29400 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.9■□□□□ 0.46
COL4A5P29400 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.9■□□□□ 0.46
COL4A5P29400 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
COL4A5P29400 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
COL4A5P29400 AC099398.1-201ENST00000567919 2776 ntBASIC17.9■□□□□ 0.46
COL4A5P29400 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A5P29400 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
COL4A5P29400 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A5P29400 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
COL4A5P29400 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A5P29400 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A5P29400 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL4A5P29400 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.9■□□□□ 0.46
COL4A5P29400 AC093752.3-201ENST00000567343 901 ntBASIC17.9■□□□□ 0.46
COL4A5P29400 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.9■□□□□ 0.46
COL4A5P29400 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.9■□□□□ 0.46
COL4A5P29400 AC009560.1-201ENST00000620208 434 ntBASIC17.9■□□□□ 0.46
COL4A5P29400 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.9■□□□□ 0.46
COL4A5P29400 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
COL4A5P29400 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.89■□□□□ 0.46
COL4A5P29400 KRT18P9-201ENST00000604826 1300 ntBASIC17.89■□□□□ 0.46
COL4A5P29400 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.89■□□□□ 0.46
COL4A5P29400 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A5P29400 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A5P29400 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.89■□□□□ 0.45
COL4A5P29400 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.89■□□□□ 0.45
COL4A5P29400 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A5P29400 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A5P29400 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
COL4A5P29400 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.89■□□□□ 0.45
COL4A5P29400 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A5P29400 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms