Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMLP26374 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMLP26374 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMLP26374 INTS4P2-202ENST00000614726 2019 ntBASIC18.47■□□□□ 0.55
CHMLP26374 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CHMLP26374 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMLP26374 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMLP26374 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMLP26374 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMLP26374 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMLP26374 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CHMLP26374 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
CHMLP26374 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMLP26374 AC007686.3-201ENST00000619017 3487 ntBASIC18.47■□□□□ 0.55
CHMLP26374 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMLP26374 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMLP26374 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.47■□□□□ 0.55
CHMLP26374 DFFBP1-201ENST00000433250 979 ntBASIC18.47■□□□□ 0.55
CHMLP26374 BCRP1-201ENST00000444246 691 ntBASIC18.47■□□□□ 0.55
CHMLP26374 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.47■□□□□ 0.55
CHMLP26374 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMLP26374 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.47■□□□□ 0.55
CHMLP26374 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMLP26374 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CHMLP26374 AC124283.3-201ENST00000570869 594 ntBASIC18.47■□□□□ 0.55
CHMLP26374 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.47■□□□□ 0.55
CHMLP26374 AC093726.1-201ENST00000608064 963 ntBASIC18.47■□□□□ 0.55
CHMLP26374 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMLP26374 PRSS30P-206ENST00000641773 873 ntBASIC18.47■□□□□ 0.55
CHMLP26374 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMLP26374 AC140479.7-201ENST00000636301 2332 ntBASIC18.47■□□□□ 0.55
CHMLP26374 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMLP26374 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHMLP26374 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMLP26374 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.47■□□□□ 0.55
CHMLP26374 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CHMLP26374 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMLP26374 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMLP26374 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMLP26374 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMLP26374 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CHMLP26374 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMLP26374 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMLP26374 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMLP26374 AL137783.1-201ENST00000623494 1896 ntBASIC18.46■□□□□ 0.55
CHMLP26374 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMLP26374 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMLP26374 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMLP26374 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMLP26374 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMLP26374 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMLP26374 AL645937.2-201ENST00000396808 931 ntBASIC18.46■□□□□ 0.55
CHMLP26374 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMLP26374 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.46■□□□□ 0.55
CHMLP26374 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.46■□□□□ 0.55
CHMLP26374 RPL13AP25-201ENST00000484130 612 ntBASIC18.46■□□□□ 0.55
CHMLP26374 AC092552.1-201ENST00000547243 906 ntBASIC18.46■□□□□ 0.55
CHMLP26374 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.46■□□□□ 0.55
CHMLP26374 RN7SL204P-201ENST00000582831 262 ntBASIC18.46■□□□□ 0.55
CHMLP26374 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.46■□□□□ 0.55
CHMLP26374 AL132655.2-201ENST00000596276 594 ntBASIC18.46■□□□□ 0.55
CHMLP26374 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.46■□□□□ 0.55
CHMLP26374 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.46■□□□□ 0.55
CHMLP26374 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CHMLP26374 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMLP26374 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMLP26374 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMLP26374 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMLP26374 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMLP26374 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMLP26374 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMLP26374 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CHMLP26374 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMLP26374 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMLP26374 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
CHMLP26374 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHMLP26374 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHMLP26374 AC007541.1-201ENST00000570282 1469 ntBASIC18.46■□□□□ 0.54
CHMLP26374 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMLP26374 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CHMLP26374 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMLP26374 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMLP26374 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHMLP26374 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMLP26374 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMLP26374 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMLP26374 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMLP26374 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMLP26374 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHMLP26374 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMLP26374 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMLP26374 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMLP26374 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMLP26374 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMLP26374 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.45■□□□□ 0.54
CHMLP26374 AC134915.1-201ENST00000426461 574 ntBASIC18.45■□□□□ 0.54
CHMLP26374 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMLP26374 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMLP26374 AC123567.1-201ENST00000548294 1261 ntBASIC18.45■□□□□ 0.54
CHMLP26374 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms