Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.87□□□□□ -0.51
RAB4AP20338 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.87□□□□□ -0.51
RAB4AP20338 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB4AP20338 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
RAB4AP20338 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
RAB4AP20338 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC11.87□□□□□ -0.51
RAB4AP20338 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.87□□□□□ -0.51
RAB4AP20338 REXO1L3P-201ENST00000622202 1288 ntBASIC11.87□□□□□ -0.51
RAB4AP20338 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.87□□□□□ -0.51
RAB4AP20338 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.87□□□□□ -0.51
RAB4AP20338 HERC2P10-201ENST00000570209 2393 ntBASIC11.87□□□□□ -0.51
RAB4AP20338 BX640514.1-201ENST00000583223 1918 ntBASIC11.87□□□□□ -0.51
RAB4AP20338 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
RAB4AP20338 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.87□□□□□ -0.51
RAB4AP20338 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB4AP20338 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB4AP20338 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB4AP20338 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.87□□□□□ -0.51
RAB4AP20338 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RAB4AP20338 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.87□□□□□ -0.51
RAB4AP20338 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB4AP20338 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB4AP20338 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RAB4AP20338 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB4AP20338 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB4AP20338 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RAB4AP20338 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC11.87□□□□□ -0.51
RAB4AP20338 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
RAB4AP20338 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RAB4AP20338 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 TNN-202ENST00000621086 4234 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.86□□□□□ -0.51
RAB4AP20338 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 AK4P3-201ENST00000418260 669 ntBASIC11.86□□□□□ -0.51
RAB4AP20338 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RAB4AP20338 MINOS1P3-201ENST00000457048 203 ntBASIC11.86□□□□□ -0.51
RAB4AP20338 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 AC096582.2-201ENST00000510860 516 ntBASIC11.86□□□□□ -0.51
RAB4AP20338 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.86□□□□□ -0.51
RAB4AP20338 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.86□□□□□ -0.51
RAB4AP20338 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.86□□□□□ -0.51
RAB4AP20338 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 AC005363.2-201ENST00000618631 242 ntBASIC11.86□□□□□ -0.51
RAB4AP20338 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB4AP20338 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RAB4AP20338 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms