Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMPD1P17405 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMPD1P17405 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.87■□□□□ 0.29
SMPD1P17405 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMPD1P17405 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMPD1P17405 SHC1P1-201ENST00000425230 1745 ntBASIC16.87■□□□□ 0.29
SMPD1P17405 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SMPD1P17405 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMPD1P17405 AL391005.1-201ENST00000623953 2435 ntBASIC16.87■□□□□ 0.29
SMPD1P17405 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SMPD1P17405 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMPD1P17405 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMPD1P17405 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SMPD1P17405 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.87■□□□□ 0.29
SMPD1P17405 RN7SKP230-201ENST00000365642 335 ntBASIC16.87■□□□□ 0.29
SMPD1P17405 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMPD1P17405 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SMPD1P17405 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.87■□□□□ 0.29
SMPD1P17405 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.87■□□□□ 0.29
SMPD1P17405 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMPD1P17405 NUP210P1-202ENST00000504322 710 ntBASIC16.87■□□□□ 0.29
SMPD1P17405 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.87■□□□□ 0.29
SMPD1P17405 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.87■□□□□ 0.29
SMPD1P17405 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.87■□□□□ 0.29
SMPD1P17405 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.87■□□□□ 0.29
SMPD1P17405 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.87■□□□□ 0.29
SMPD1P17405 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.87■□□□□ 0.29
SMPD1P17405 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMPD1P17405 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.87■□□□□ 0.29
SMPD1P17405 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMPD1P17405 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
SMPD1P17405 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMPD1P17405 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SMPD1P17405 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMPD1P17405 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SMPD1P17405 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMPD1P17405 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.87■□□□□ 0.29
SMPD1P17405 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.87■□□□□ 0.29
SMPD1P17405 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
SMPD1P17405 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SMPD1P17405 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMPD1P17405 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SMPD1P17405 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMPD1P17405 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
SMPD1P17405 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.86■□□□□ 0.29
SMPD1P17405 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.86■□□□□ 0.29
SMPD1P17405 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.86■□□□□ 0.29
SMPD1P17405 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SMPD1P17405 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 AC010141.1-201ENST00000411585 623 ntBASIC16.86■□□□□ 0.29
SMPD1P17405 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.86■□□□□ 0.29
SMPD1P17405 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.86■□□□□ 0.29
SMPD1P17405 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 AC012618.1-201ENST00000461223 412 ntBASIC16.86■□□□□ 0.29
SMPD1P17405 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.86■□□□□ 0.29
SMPD1P17405 MARK2P5-201ENST00000507649 634 ntBASIC16.86■□□□□ 0.29
SMPD1P17405 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.86■□□□□ 0.29
SMPD1P17405 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SMPD1P17405 DUX4L46-201ENST00000566845 751 ntBASIC16.86■□□□□ 0.29
SMPD1P17405 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 MIR4706-201ENST00000582134 82 ntBASIC16.86■□□□□ 0.29
SMPD1P17405 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.86■□□□□ 0.29
SMPD1P17405 AF254983.2-201ENST00000612331 135 ntBASIC16.86■□□□□ 0.29
SMPD1P17405 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
SMPD1P17405 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 AL805961.1-203ENST00000641078 1258 ntBASIC16.86■□□□□ 0.29
SMPD1P17405 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.86■□□□□ 0.29
SMPD1P17405 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SMPD1P17405 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SMPD1P17405 AC012508.2-201ENST00000567613 1472 ntBASIC16.86■□□□□ 0.29
SMPD1P17405 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMPD1P17405 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SMPD1P17405 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.85■□□□□ 0.29
SMPD1P17405 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SMPD1P17405 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.85■□□□□ 0.29
SMPD1P17405 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMPD1P17405 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.85■□□□□ 0.29
SMPD1P17405 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms