Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TOP1P11387 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TOP1P11387 AC134312.5-201ENST00000568031 1313 ntBASIC18.04■□□□□ 0.48
TOP1P11387 MSTO2P-201ENST00000314835 1709 ntBASIC18.04■□□□□ 0.48
TOP1P11387 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.04■□□□□ 0.48
TOP1P11387 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TOP1P11387 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
TOP1P11387 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TOP1P11387 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.04■□□□□ 0.48
TOP1P11387 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TOP1P11387 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TOP1P11387 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TOP1P11387 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TOP1P11387 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TOP1P11387 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.04■□□□□ 0.48
TOP1P11387 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.04■□□□□ 0.48
TOP1P11387 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.04■□□□□ 0.48
TOP1P11387 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.04■□□□□ 0.48
TOP1P11387 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.04■□□□□ 0.48
TOP1P11387 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TOP1P11387 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.04■□□□□ 0.48
TOP1P11387 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.04■□□□□ 0.48
TOP1P11387 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.04■□□□□ 0.48
TOP1P11387 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.04■□□□□ 0.48
TOP1P11387 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TOP1P11387 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.04■□□□□ 0.48
TOP1P11387 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.04■□□□□ 0.48
TOP1P11387 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.04■□□□□ 0.48
TOP1P11387 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TOP1P11387 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TOP1P11387 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.04■□□□□ 0.48
TOP1P11387 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TOP1P11387 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TOP1P11387 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.04■□□□□ 0.48
TOP1P11387 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.04■□□□□ 0.48
TOP1P11387 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TOP1P11387 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TOP1P11387 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.04■□□□□ 0.48
TOP1P11387 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
TOP1P11387 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 AC093525.8-201ENST00000624099 1342 ntBASIC18.03■□□□□ 0.48
TOP1P11387 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TOP1P11387 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.03■□□□□ 0.48
TOP1P11387 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.03■□□□□ 0.48
TOP1P11387 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.03■□□□□ 0.48
TOP1P11387 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 AC004066.1-201ENST00000502488 802 ntBASIC18.03■□□□□ 0.48
TOP1P11387 IGHV3-71-201ENST00000523324 359 ntBASIC18.03■□□□□ 0.48
TOP1P11387 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.03■□□□□ 0.48
TOP1P11387 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.03■□□□□ 0.48
TOP1P11387 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.03■□□□□ 0.48
TOP1P11387 AL512343.1-201ENST00000605837 169 ntBASIC18.03■□□□□ 0.48
TOP1P11387 AL022328.1-201ENST00000610050 478 ntBASIC18.03■□□□□ 0.48
TOP1P11387 AP005019.2-201ENST00000615104 511 ntBASIC18.03■□□□□ 0.48
TOP1P11387 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.03■□□□□ 0.48
TOP1P11387 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TOP1P11387 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.03■□□□□ 0.48
TOP1P11387 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TOP1P11387 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
TOP1P11387 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
TOP1P11387 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.03■□□□□ 0.48
TOP1P11387 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TOP1P11387 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TOP1P11387 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TOP1P11387 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TOP1P11387 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TOP1P11387 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TOP1P11387 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.02■□□□□ 0.48
TOP1P11387 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TOP1P11387 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.02■□□□□ 0.48
TOP1P11387 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.02■□□□□ 0.48
TOP1P11387 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TOP1P11387 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TOP1P11387 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TOP1P11387 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TOP1P11387 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TOP1P11387 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TOP1P11387 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TOP1P11387 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.02■□□□□ 0.48
TOP1P11387 KRT43P-201ENST00000434019 910 ntBASIC18.02■□□□□ 0.48
TOP1P11387 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.02■□□□□ 0.48
TOP1P11387 ATP5G2P4-201ENST00000442175 420 ntBASIC18.02■□□□□ 0.48
TOP1P11387 BCRP2-202ENST00000447763 634 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms