Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.5■□□□□ 0.07
THRAP10827 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
THRAP10827 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.5■□□□□ 0.07
THRAP10827 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
THRAP10827 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.5■□□□□ 0.07
THRAP10827 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
THRAP10827 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
THRAP10827 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 KRT8P44-201ENST00000441609 1350 ntBASIC15.49■□□□□ 0.07
THRAP10827 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.49■□□□□ 0.07
THRAP10827 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.49■□□□□ 0.07
THRAP10827 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
THRAP10827 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.49■□□□□ 0.07
THRAP10827 AC126365.1-201ENST00000578585 1514 ntBASIC15.49■□□□□ 0.07
THRAP10827 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
THRAP10827 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.49■□□□□ 0.07
THRAP10827 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
THRAP10827 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.49■□□□□ 0.07
THRAP10827 SBF1P1-201ENST00000444527 5631 ntBASIC15.49■□□□□ 0.07
THRAP10827 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 AC138969.3-201ENST00000546612 1459 ntBASIC15.49■□□□□ 0.07
THRAP10827 AC138932.2-201ENST00000548268 1459 ntBASIC15.49■□□□□ 0.07
THRAP10827 AC126755.4-201ENST00000549796 1459 ntBASIC15.49■□□□□ 0.07
THRAP10827 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.49■□□□□ 0.07
THRAP10827 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
THRAP10827 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.49■□□□□ 0.07
THRAP10827 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.49■□□□□ 0.07
THRAP10827 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.49■□□□□ 0.07
THRAP10827 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.49■□□□□ 0.07
THRAP10827 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.49■□□□□ 0.07
THRAP10827 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.49■□□□□ 0.07
THRAP10827 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.49■□□□□ 0.07
THRAP10827 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.49■□□□□ 0.07
THRAP10827 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.49■□□□□ 0.07
THRAP10827 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.49■□□□□ 0.07
THRAP10827 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.49■□□□□ 0.07
THRAP10827 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.49■□□□□ 0.07
THRAP10827 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.49■□□□□ 0.07
THRAP10827 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.49■□□□□ 0.07
THRAP10827 MROH4P-201ENST00000431302 1578 ntBASIC15.49■□□□□ 0.07
THRAP10827 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.49■□□□□ 0.07
THRAP10827 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
THRAP10827 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
THRAP10827 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.48■□□□□ 0.07
THRAP10827 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.48■□□□□ 0.07
THRAP10827 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
THRAP10827 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.48■□□□□ 0.07
THRAP10827 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
THRAP10827 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.48■□□□□ 0.07
THRAP10827 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.48■□□□□ 0.07
THRAP10827 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.48■□□□□ 0.07
THRAP10827 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.48■□□□□ 0.07
THRAP10827 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.48■□□□□ 0.07
THRAP10827 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.48■□□□□ 0.07
THRAP10827 SRD5A3P1-201ENST00000603021 949 ntBASIC15.48■□□□□ 0.07
THRAP10827 AC004461.2-201ENST00000629517 803 ntBASIC15.48■□□□□ 0.07
THRAP10827 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
THRAP10827 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THRAP10827 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
THRAP10827 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.48■□□□□ 0.07
THRAP10827 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms