Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 AC005252.2-201ENST00000624630 1141 ntBASIC15.55■□□□□ 0.08
HLA-DQB2P05538 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 AC023824.1-201ENST00000562945 2975 ntBASIC15.55■□□□□ 0.08
HLA-DQB2P05538 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DQB2P05538 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 CICP24-201ENST00000605464 2705 ntBASIC15.54■□□□□ 0.08
HLA-DQB2P05538 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 LILRP1-201ENST00000444199 1370 ntBASIC15.54■□□□□ 0.08
HLA-DQB2P05538 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 RNU1-114P-201ENST00000365297 166 ntBASIC15.54■□□□□ 0.08
HLA-DQB2P05538 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DQB2P05538 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 AC011270.2-201ENST00000624293 2550 ntBASIC15.53■□□□□ 0.08
HLA-DQB2P05538 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 CLUHP6-201ENST00000580789 941 ntBASIC15.53■□□□□ 0.08
HLA-DQB2P05538 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 CU634019.7-201ENST00000624153 1185 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms