Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
POLR1AO95602 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC21.8■■□□□ 1.08
POLR1AO95602 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC21.8■■□□□ 1.08
POLR1AO95602 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC21.8■■□□□ 1.08
POLR1AO95602 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC21.8■■□□□ 1.08
POLR1AO95602 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC21.8■■□□□ 1.08
POLR1AO95602 HNRNPA1P41-201ENST00000397777 928 ntBASIC21.8■■□□□ 1.08
POLR1AO95602 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC21.8■■□□□ 1.08
POLR1AO95602 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC21.8■■□□□ 1.08
POLR1AO95602 MIR4683-201ENST00000579659 81 ntBASIC21.8■■□□□ 1.08
POLR1AO95602 NAP1L6-202ENST00000641404 1222 ntBASIC21.8■■□□□ 1.08
POLR1AO95602 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC21.8■■□□□ 1.08
POLR1AO95602 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC21.8■■□□□ 1.08
POLR1AO95602 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
POLR1AO95602 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR1AO95602 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
POLR1AO95602 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC21.79■■□□□ 1.08
POLR1AO95602 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC21.79■■□□□ 1.08
POLR1AO95602 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
POLR1AO95602 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.79■■□□□ 1.08
POLR1AO95602 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC21.79■■□□□ 1.08
POLR1AO95602 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
POLR1AO95602 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR1AO95602 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC21.79■■□□□ 1.08
POLR1AO95602 RPS15-201ENST00000233609 534 ntTSL 2 BASIC21.79■■□□□ 1.08
POLR1AO95602 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC21.79■■□□□ 1.08
POLR1AO95602 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC21.79■■□□□ 1.08
POLR1AO95602 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC21.79■■□□□ 1.08
POLR1AO95602 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
POLR1AO95602 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC21.79■■□□□ 1.08
POLR1AO95602 TUBB8P8-201ENST00000458717 1058 ntBASIC21.79■■□□□ 1.08
POLR1AO95602 RPL18AP3-201ENST00000462885 528 ntBASIC21.79■■□□□ 1.08
POLR1AO95602 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC21.79■■□□□ 1.08
POLR1AO95602 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC21.79■■□□□ 1.08
POLR1AO95602 RPS15-205ENST00000586686 562 ntTSL 5 BASIC21.79■■□□□ 1.08
POLR1AO95602 RPS15-208ENST00000591804 711 ntTSL 5 BASIC21.79■■□□□ 1.08
POLR1AO95602 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR1AO95602 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC21.79■■□□□ 1.08
POLR1AO95602 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC21.79■■□□□ 1.08
POLR1AO95602 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR1AO95602 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
POLR1AO95602 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
POLR1AO95602 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
POLR1AO95602 MFF-204ENST00000353339 2186 ntTSL 5 BASIC21.79■■□□□ 1.08
POLR1AO95602 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR1AO95602 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR1AO95602 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR1AO95602 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC21.78■■□□□ 1.08
POLR1AO95602 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1AO95602 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
POLR1AO95602 SOD2-202ENST00000367054 815 ntTSL 2 BASIC21.78■■□□□ 1.08
POLR1AO95602 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC21.78■■□□□ 1.08
POLR1AO95602 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC21.78■■□□□ 1.08
POLR1AO95602 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1AO95602 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC21.78■■□□□ 1.08
POLR1AO95602 AL157792.1-201ENST00000488281 530 ntBASIC21.78■■□□□ 1.08
POLR1AO95602 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1AO95602 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC21.78■■□□□ 1.08
POLR1AO95602 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1AO95602 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC21.78■■□□□ 1.08
POLR1AO95602 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1AO95602 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1AO95602 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1AO95602 AC073347.1-201ENST00000421633 2643 ntBASIC21.78■■□□□ 1.08
POLR1AO95602 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1AO95602 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1AO95602 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1AO95602 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1AO95602 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1AO95602 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
POLR1AO95602 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC21.78■■□□□ 1.08
POLR1AO95602 AC023157.3-201ENST00000619086 2088 ntBASIC21.78■■□□□ 1.08
POLR1AO95602 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC21.78■■□□□ 1.08
POLR1AO95602 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
POLR1AO95602 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1AO95602 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1AO95602 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
POLR1AO95602 AP000356.3-201ENST00000382243 753 ntBASIC21.77■■□□□ 1.08
POLR1AO95602 SERF2-206ENST00000409291 807 ntTSL 3 BASIC21.77■■□□□ 1.08
POLR1AO95602 AC004066.1-201ENST00000502488 802 ntBASIC21.77■■□□□ 1.08
POLR1AO95602 NSD1-211ENST00000511258 809 ntTSL 3 BASIC21.77■■□□□ 1.08
POLR1AO95602 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC21.77■■□□□ 1.08
POLR1AO95602 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC21.77■■□□□ 1.08
POLR1AO95602 FOS-204ENST00000554617 796 ntTSL 2 BASIC21.77■■□□□ 1.08
POLR1AO95602 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC21.77■■□□□ 1.08
POLR1AO95602 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC21.77■■□□□ 1.08
POLR1AO95602 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
POLR1AO95602 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1AO95602 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC21.77■■□□□ 1.08
POLR1AO95602 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1AO95602 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1AO95602 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms