Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.25■□□□□ 0.51
MBD4O95243 ECM1P1-201ENST00000604092 1279 ntBASIC18.25■□□□□ 0.51
MBD4O95243 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.25■□□□□ 0.51
MBD4O95243 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.25■□□□□ 0.51
MBD4O95243 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.25■□□□□ 0.51
MBD4O95243 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.25■□□□□ 0.51
MBD4O95243 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MBD4O95243 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
MBD4O95243 AL109954.1-202ENST00000564051 2148 ntBASIC18.25■□□□□ 0.51
MBD4O95243 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
MBD4O95243 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
MBD4O95243 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
MBD4O95243 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.24■□□□□ 0.51
MBD4O95243 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
MBD4O95243 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.24■□□□□ 0.51
MBD4O95243 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.24■□□□□ 0.51
MBD4O95243 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.24■□□□□ 0.51
MBD4O95243 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.24■□□□□ 0.51
MBD4O95243 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 AC026954.1-201ENST00000429771 1293 ntBASIC18.24■□□□□ 0.51
MBD4O95243 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.24■□□□□ 0.51
MBD4O95243 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
MBD4O95243 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.24■□□□□ 0.51
MBD4O95243 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.24■□□□□ 0.51
MBD4O95243 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.24■□□□□ 0.51
MBD4O95243 AC138951.2-201ENST00000623455 1161 ntBASIC18.24■□□□□ 0.51
MBD4O95243 RHOXF1P1-202ENST00000635473 501 ntBASIC18.24■□□□□ 0.51
MBD4O95243 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.24■□□□□ 0.51
MBD4O95243 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 AC055811.4-201ENST00000624039 1754 ntBASIC18.24■□□□□ 0.51
MBD4O95243 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 REXO1L2P-201ENST00000425429 2069 ntBASIC18.24■□□□□ 0.51
MBD4O95243 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.24■□□□□ 0.51
MBD4O95243 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
MBD4O95243 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD4O95243 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.23■□□□□ 0.51
MBD4O95243 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.23■□□□□ 0.51
MBD4O95243 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MBD4O95243 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.23■□□□□ 0.51
MBD4O95243 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
MBD4O95243 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MBD4O95243 AC091951.1-201ENST00000512854 2465 ntBASIC18.23■□□□□ 0.51
MBD4O95243 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MBD4O95243 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD4O95243 AL137783.1-201ENST00000623494 1896 ntBASIC18.23■□□□□ 0.51
MBD4O95243 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.23■□□□□ 0.51
MBD4O95243 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD4O95243 MROH4P-201ENST00000431302 1578 ntBASIC18.23■□□□□ 0.51
MBD4O95243 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.23■□□□□ 0.51
MBD4O95243 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.23■□□□□ 0.51
MBD4O95243 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.23■□□□□ 0.51
MBD4O95243 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.23■□□□□ 0.51
MBD4O95243 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.23■□□□□ 0.51
MBD4O95243 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
MBD4O95243 HLA-V-201ENST00000429037 534 ntBASIC18.23■□□□□ 0.51
MBD4O95243 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.23■□□□□ 0.51
MBD4O95243 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.23■□□□□ 0.51
MBD4O95243 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.23■□□□□ 0.51
MBD4O95243 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
MBD4O95243 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.23■□□□□ 0.51
MBD4O95243 MIR6752-201ENST00000618442 71 ntBASIC18.23■□□□□ 0.51
MBD4O95243 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.23■□□□□ 0.51
MBD4O95243 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.23■□□□□ 0.51
MBD4O95243 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
MBD4O95243 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
MBD4O95243 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD4O95243 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD4O95243 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
MBD4O95243 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.23■□□□□ 0.51
MBD4O95243 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
MBD4O95243 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
MBD4O95243 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD4O95243 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms