Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.26■□□□□ 0.35
SORBS3O60504 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SORBS3O60504 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SORBS3O60504 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
SORBS3O60504 MIR326-201ENST00000362220 95 ntBASIC17.26■□□□□ 0.35
SORBS3O60504 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SORBS3O60504 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.26■□□□□ 0.35
SORBS3O60504 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.26■□□□□ 0.35
SORBS3O60504 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.26■□□□□ 0.35
SORBS3O60504 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SORBS3O60504 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.26■□□□□ 0.35
SORBS3O60504 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.26■□□□□ 0.35
SORBS3O60504 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.26■□□□□ 0.35
SORBS3O60504 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.26■□□□□ 0.35
SORBS3O60504 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
SORBS3O60504 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SORBS3O60504 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.26■□□□□ 0.35
SORBS3O60504 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.26■□□□□ 0.35
SORBS3O60504 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.26■□□□□ 0.35
SORBS3O60504 MIR6869-201ENST00000619434 62 ntBASIC17.26■□□□□ 0.35
SORBS3O60504 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SORBS3O60504 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.26■□□□□ 0.35
SORBS3O60504 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
SORBS3O60504 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SORBS3O60504 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.26■□□□□ 0.35
SORBS3O60504 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SORBS3O60504 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.26■□□□□ 0.35
SORBS3O60504 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.26■□□□□ 0.35
SORBS3O60504 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.26■□□□□ 0.35
SORBS3O60504 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SORBS3O60504 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 AC105250.1-201ENST00000509378 2057 ntBASIC17.25■□□□□ 0.35
SORBS3O60504 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 TUBB1P2-201ENST00000422712 1306 ntBASIC17.25■□□□□ 0.35
SORBS3O60504 TUBB1P1-201ENST00000503144 1300 ntBASIC17.25■□□□□ 0.35
SORBS3O60504 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SORBS3O60504 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.25■□□□□ 0.35
SORBS3O60504 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SORBS3O60504 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.25■□□□□ 0.35
SORBS3O60504 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.25■□□□□ 0.35
SORBS3O60504 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 AC004066.1-201ENST00000502488 802 ntBASIC17.25■□□□□ 0.35
SORBS3O60504 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.25■□□□□ 0.35
SORBS3O60504 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SORBS3O60504 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.25■□□□□ 0.35
SORBS3O60504 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.25■□□□□ 0.35
SORBS3O60504 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.25■□□□□ 0.35
SORBS3O60504 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.25■□□□□ 0.35
SORBS3O60504 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SORBS3O60504 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.25■□□□□ 0.35
SORBS3O60504 AC091271.1-201ENST00000611877 1162 ntBASIC17.25■□□□□ 0.35
SORBS3O60504 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.25■□□□□ 0.35
SORBS3O60504 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.25■□□□□ 0.35
SORBS3O60504 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.25■□□□□ 0.35
SORBS3O60504 REXO1L5P-201ENST00000622260 2098 ntBASIC17.25■□□□□ 0.35
SORBS3O60504 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SORBS3O60504 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.25■□□□□ 0.35
SORBS3O60504 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SORBS3O60504 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SORBS3O60504 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SORBS3O60504 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SORBS3O60504 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.24■□□□□ 0.35
SORBS3O60504 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SORBS3O60504 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SORBS3O60504 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.24■□□□□ 0.35
SORBS3O60504 AL157414.3-201ENST00000624276 1954 ntBASIC17.24■□□□□ 0.35
SORBS3O60504 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.24■□□□□ 0.35
SORBS3O60504 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SORBS3O60504 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SORBS3O60504 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms