Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.62■□□□□ 0.25
EXTL3O43909 AL157414.3-201ENST00000624276 1954 ntBASIC16.62■□□□□ 0.25
EXTL3O43909 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.62■□□□□ 0.25
EXTL3O43909 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.62■□□□□ 0.25
EXTL3O43909 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
EXTL3O43909 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.62■□□□□ 0.25
EXTL3O43909 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.62■□□□□ 0.25
EXTL3O43909 BAATP1-201ENST00000412284 1225 ntBASIC16.62■□□□□ 0.25
EXTL3O43909 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.62■□□□□ 0.25
EXTL3O43909 TTTY23B-201ENST00000442790 549 ntBASIC16.62■□□□□ 0.25
EXTL3O43909 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 KRT18P25-201ENST00000508931 1278 ntBASIC16.62■□□□□ 0.25
EXTL3O43909 PTP4A1P2-201ENST00000546033 454 ntBASIC16.62■□□□□ 0.25
EXTL3O43909 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.62■□□□□ 0.25
EXTL3O43909 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.62■□□□□ 0.25
EXTL3O43909 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.62■□□□□ 0.25
EXTL3O43909 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
EXTL3O43909 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 MSTO2P-201ENST00000314835 1709 ntBASIC16.62■□□□□ 0.25
EXTL3O43909 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.62■□□□□ 0.25
EXTL3O43909 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
EXTL3O43909 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.62■□□□□ 0.25
EXTL3O43909 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EXTL3O43909 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EXTL3O43909 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EXTL3O43909 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
EXTL3O43909 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.61■□□□□ 0.25
EXTL3O43909 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
EXTL3O43909 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EXTL3O43909 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.61■□□□□ 0.25
EXTL3O43909 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EXTL3O43909 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.61■□□□□ 0.25
EXTL3O43909 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EXTL3O43909 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.61■□□□□ 0.25
EXTL3O43909 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EXTL3O43909 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
EXTL3O43909 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
EXTL3O43909 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
EXTL3O43909 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EXTL3O43909 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.61■□□□□ 0.25
EXTL3O43909 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.61■□□□□ 0.25
EXTL3O43909 AC012441.1-201ENST00000446669 685 ntBASIC16.61■□□□□ 0.25
EXTL3O43909 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.61■□□□□ 0.25
EXTL3O43909 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.61■□□□□ 0.25
EXTL3O43909 AC068587.3-201ENST00000526613 355 ntBASIC16.61■□□□□ 0.25
EXTL3O43909 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.61■□□□□ 0.25
EXTL3O43909 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.61■□□□□ 0.25
EXTL3O43909 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.61■□□□□ 0.25
EXTL3O43909 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
EXTL3O43909 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.61■□□□□ 0.25
EXTL3O43909 TCAF2P1-201ENST00000291129 2421 ntBASIC16.61■□□□□ 0.25
EXTL3O43909 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
EXTL3O43909 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EXTL3O43909 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
EXTL3O43909 AC134312.5-201ENST00000568031 1313 ntBASIC16.61■□□□□ 0.25
EXTL3O43909 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
EXTL3O43909 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EXTL3O43909 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EXTL3O43909 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.61■□□□□ 0.25
EXTL3O43909 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
EXTL3O43909 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
EXTL3O43909 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
EXTL3O43909 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.61■□□□□ 0.25
EXTL3O43909 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EXTL3O43909 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
EXTL3O43909 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.6■□□□□ 0.25
EXTL3O43909 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.6■□□□□ 0.25
EXTL3O43909 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
EXTL3O43909 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.6■□□□□ 0.25
EXTL3O43909 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EXTL3O43909 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.6■□□□□ 0.25
EXTL3O43909 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.6■□□□□ 0.25
EXTL3O43909 ACTBP8-201ENST00000403258 1108 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms