Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 AC092933.1-201ENST00000393644 945 ntBASIC14.72□□□□□ -0.05
PRICKLE3O43900 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 DUX4L47-201ENST00000566374 394 ntBASIC14.72□□□□□ -0.05
PRICKLE3O43900 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 AL162274.1-201ENST00000617191 1098 ntBASIC14.72□□□□□ -0.05
PRICKLE3O43900 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 AL359258.3-201ENST00000622910 2331 ntBASIC14.72□□□□□ -0.05
PRICKLE3O43900 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 AC023157.3-201ENST00000619086 2088 ntBASIC14.72□□□□□ -0.05
PRICKLE3O43900 REXO1L5P-201ENST00000622260 2098 ntBASIC14.72□□□□□ -0.05
PRICKLE3O43900 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 AL157414.3-201ENST00000624276 1954 ntBASIC14.71□□□□□ -0.05
PRICKLE3O43900 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 AC079776.1-201ENST00000401540 1152 ntBASIC14.71□□□□□ -0.05
PRICKLE3O43900 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 ATP5G2P4-201ENST00000442175 420 ntBASIC14.71□□□□□ -0.05
PRICKLE3O43900 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 GNRHR2-203ENST00000581100 1187 ntBASIC14.71□□□□□ -0.05
PRICKLE3O43900 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PRICKLE3O43900 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PRICKLE3O43900 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PRICKLE3O43900 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PRICKLE3O43900 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
PRICKLE3O43900 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PRICKLE3O43900 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.71□□□□□ -0.06
PRICKLE3O43900 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PRICKLE3O43900 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.71□□□□□ -0.06
PRICKLE3O43900 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PRICKLE3O43900 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PRICKLE3O43900 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PRICKLE3O43900 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PRICKLE3O43900 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PRICKLE3O43900 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms