Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXA2O43364 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 AC011742.3-201ENST00000439053 820 ntBASIC16.29■□□□□ 0.2
HOXA2O43364 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXA2O43364 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.29■□□□□ 0.2
HOXA2O43364 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.29■□□□□ 0.2
HOXA2O43364 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.29■□□□□ 0.2
HOXA2O43364 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.29■□□□□ 0.2
HOXA2O43364 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.29■□□□□ 0.2
HOXA2O43364 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.29■□□□□ 0.2
HOXA2O43364 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
HOXA2O43364 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXA2O43364 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HOXA2O43364 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXA2O43364 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HOXA2O43364 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXA2O43364 AC012508.2-201ENST00000567613 1472 ntBASIC16.29■□□□□ 0.2
HOXA2O43364 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA2O43364 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA2O43364 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HOXA2O43364 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA2O43364 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
HOXA2O43364 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA2O43364 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA2O43364 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA2O43364 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXA2O43364 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HOXA2O43364 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA2O43364 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA2O43364 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
HOXA2O43364 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA2O43364 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA2O43364 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA2O43364 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.28■□□□□ 0.2
HOXA2O43364 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.28■□□□□ 0.2
HOXA2O43364 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HOXA2O43364 RN7SKP175-201ENST00000408472 289 ntBASIC16.28■□□□□ 0.2
HOXA2O43364 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXA2O43364 AL133466.1-201ENST00000447582 150 ntBASIC16.28■□□□□ 0.2
HOXA2O43364 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXA2O43364 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.28■□□□□ 0.2
HOXA2O43364 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXA2O43364 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.28■□□□□ 0.2
HOXA2O43364 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
HOXA2O43364 AC004466.1-201ENST00000599515 1080 ntBASIC16.28■□□□□ 0.2
HOXA2O43364 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HOXA2O43364 CU633904.3-201ENST00000624042 1029 ntBASIC16.28■□□□□ 0.2
HOXA2O43364 AC015967.2-201ENST00000624092 234 ntBASIC16.28■□□□□ 0.2
HOXA2O43364 AC006435.4-201ENST00000625037 234 ntBASIC16.28■□□□□ 0.2
HOXA2O43364 AL356737.1-201ENST00000634391 234 ntBASIC16.28■□□□□ 0.2
HOXA2O43364 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA2O43364 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HOXA2O43364 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA2O43364 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HOXA2O43364 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXA2O43364 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA2O43364 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA2O43364 AL513523.2-202ENST00000427283 2040 ntBASIC16.28■□□□□ 0.2
HOXA2O43364 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA2O43364 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HOXA2O43364 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.27■□□□□ 0.2
HOXA2O43364 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXA2O43364 AC099398.1-201ENST00000567919 2776 ntBASIC16.27■□□□□ 0.2
HOXA2O43364 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.27■□□□□ 0.2
HOXA2O43364 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXA2O43364 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HOXA2O43364 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXA2O43364 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.27■□□□□ 0.2
HOXA2O43364 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXA2O43364 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HOXA2O43364 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HOXA2O43364 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXA2O43364 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXA2O43364 ELK2AP-201ENST00000392510 1007 ntBASIC16.27■□□□□ 0.2
HOXA2O43364 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HOXA2O43364 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HOXA2O43364 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.27■□□□□ 0.2
HOXA2O43364 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.27■□□□□ 0.2
HOXA2O43364 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.27■□□□□ 0.2
HOXA2O43364 RN7SL190P-201ENST00000582519 257 ntBASIC16.27■□□□□ 0.2
HOXA2O43364 RN7SL163P-201ENST00000583100 276 ntBASIC16.27■□□□□ 0.2
HOXA2O43364 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.27■□□□□ 0.2
HOXA2O43364 AL136301.1-201ENST00000615830 422 ntBASIC16.27■□□□□ 0.2
HOXA2O43364 AC091544.8-201ENST00000619490 361 ntBASIC16.27■□□□□ 0.2
HOXA2O43364 AC091812.3-201ENST00000621362 345 ntBASIC16.27■□□□□ 0.2
HOXA2O43364 AC002472.3-201ENST00000640124 621 ntBASIC16.27■□□□□ 0.2
HOXA2O43364 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXA2O43364 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HOXA2O43364 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HOXA2O43364 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
HOXA2O43364 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.27■□□□□ 0.19
HOXA2O43364 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.27■□□□□ 0.19
HOXA2O43364 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.27■□□□□ 0.19
HOXA2O43364 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HOXA2O43364 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms