Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 AC018638.5-201ENST00000450885 754 ntBASIC18.73■□□□□ 0.59
RGPD3A6NKT7 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RGPD3A6NKT7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 TREHP1-201ENST00000531328 465 ntBASIC18.72■□□□□ 0.59
RGPD3A6NKT7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 LINC02447-202ENST00000501888 2146 ntBASIC18.72■□□□□ 0.59
RGPD3A6NKT7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.72■□□□□ 0.59
RGPD3A6NKT7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 AC007292.2-201ENST00000593524 1812 ntBASIC18.71■□□□□ 0.59
RGPD3A6NKT7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 AC098934.1-203ENST00000442868 1262 ntBASIC18.71■□□□□ 0.59
RGPD3A6NKT7 BPIFB5P-201ENST00000457066 1099 ntBASIC18.71■□□□□ 0.59
RGPD3A6NKT7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 DUT-207ENST00000559416 635 ntTSL 2 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 MBP-238ENST00000580402 915 ntTSL 5 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 AC012508.2-201ENST00000567613 1472 ntBASIC18.71■□□□□ 0.59
RGPD3A6NKT7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.71■□□□□ 0.59
RGPD3A6NKT7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RGPD3A6NKT7 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RGPD3A6NKT7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.7■□□□□ 0.58
RGPD3A6NKT7 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.7■□□□□ 0.58
RGPD3A6NKT7 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RGPD3A6NKT7 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RGPD3A6NKT7 PPP1R2P4-201ENST00000424051 595 ntBASIC18.7■□□□□ 0.58
RGPD3A6NKT7 AC023141.7-201ENST00000430646 407 ntBASIC18.7■□□□□ 0.58
RGPD3A6NKT7 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RGPD3A6NKT7 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC18.7■□□□□ 0.58
RGPD3A6NKT7 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC18.7■□□□□ 0.58
RGPD3A6NKT7 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC18.7■□□□□ 0.58
RGPD3A6NKT7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms