Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 AC092119.3-201ENST00000612618 583 ntBASIC10.81□□□□□ -0.68
LINC01546A6NGU7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 DDC-213ENST00000617822 1809 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 HAL-202ENST00000538703 2637 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01546A6NGU7 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 RN7SL832P-201ENST00000607781 1756 ntBASIC10.8□□□□□ -0.68
LINC01546A6NGU7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 AC012617.1-204ENST00000586340 2305 ntBASIC10.8□□□□□ -0.68
LINC01546A6NGU7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 AC011840.2-201ENST00000563063 1520 ntBASIC10.8□□□□□ -0.68
LINC01546A6NGU7 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 FO393414.2-201ENST00000405153 598 ntBASIC10.8□□□□□ -0.68
LINC01546A6NGU7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 AC142381.1-201ENST00000426099 345 ntBASIC10.8□□□□□ -0.68
LINC01546A6NGU7 VN2R19P-201ENST00000442399 1052 ntBASIC10.8□□□□□ -0.68
LINC01546A6NGU7 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 MIR4751-201ENST00000578027 74 ntBASIC10.8□□□□□ -0.68
LINC01546A6NGU7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 AC025181.2-201ENST00000606994 802 ntBASIC10.8□□□□□ -0.68
LINC01546A6NGU7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 AC007064.4-201ENST00000637740 555 ntBASIC10.8□□□□□ -0.68
LINC01546A6NGU7 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms