Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 ELK2AP-201ENST00000392510 1007 ntBASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 AL136301.1-201ENST00000615830 422 ntBASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 AC003102.2-201ENST00000589195 1469 ntBASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC144AA2RUR9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 RBM38-204ENST00000371219 760 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 AL162426.1-201ENST00000624141 743 ntBASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 SHC1P1-201ENST00000425230 1745 ntBASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 KRT8P29-201ENST00000420409 1371 ntBASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC144AA2RUR9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 DEF8-202ENST00000418391 852 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 AC106872.11-201ENST00000605838 421 ntBASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC144AA2RUR9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC144AA2RUR9 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC144AA2RUR9 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCDC144AA2RUR9 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC144AA2RUR9 TLE1P1-201ENST00000422965 589 ntBASIC21.72■■□□□ 1.07
CCDC144AA2RUR9 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC144AA2RUR9 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC21.72■■□□□ 1.07
CCDC144AA2RUR9 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms