Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 FAM197Y7-201ENST00000432892 766 ntBASIC16.18■□□□□ 0.18
CDH9Q9ULB4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 RNA5SP486-201ENST00000515961 83 ntBASIC16.18■□□□□ 0.18
CDH9Q9ULB4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.18■□□□□ 0.18
CDH9Q9ULB4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 RPS2P32-201ENST00000439199 892 ntBASIC16.17■□□□□ 0.18
CDH9Q9ULB4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 DUX4L47-201ENST00000566374 394 ntBASIC16.17■□□□□ 0.18
CDH9Q9ULB4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH9Q9ULB4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 AC006001.1-201ENST00000325130 474 ntBASIC16.16■□□□□ 0.18
CDH9Q9ULB4 TPM3P8-201ENST00000330554 643 ntBASIC16.16■□□□□ 0.18
CDH9Q9ULB4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 AC099336.1-201ENST00000417053 1171 ntBASIC16.16■□□□□ 0.18
CDH9Q9ULB4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 CSF2RBP1-201ENST00000447905 391 ntBASIC16.16■□□□□ 0.18
CDH9Q9ULB4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDH9Q9ULB4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms