Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 SSR4P1-203ENST00000599569 2260 ntBASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 AC004066.1-201ENST00000502488 802 ntBASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 INTS4P2-202ENST00000614726 2019 ntBASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 AP006294.1-201ENST00000415407 339 ntBASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 SOCS2P1-201ENST00000417727 557 ntBASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 VDAC1P7-201ENST00000462417 847 ntBASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 AC011495.1-201ENST00000498085 584 ntBASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 AC026410.3-201ENST00000514280 936 ntBASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 ENPP7P5-201ENST00000541031 1031 ntBASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 MIR8072-201ENST00000614241 80 ntBASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 AC022532.1-201ENST00000624563 1728 ntBASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 AC099063.4-201ENST00000641099 1602 ntBASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SDHAF3Q9NRP4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
SDHAF3Q9NRP4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms