Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
BRF2Q9HAW0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
BRF2Q9HAW0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 DRD5P1-201ENST00000456605 1438 ntBASIC14.7□□□□□ -0.06
BRF2Q9HAW0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 AL645937.2-201ENST00000396808 931 ntBASIC14.7□□□□□ -0.06
BRF2Q9HAW0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 MRPS18AP1-201ENST00000414458 589 ntBASIC14.7□□□□□ -0.06
BRF2Q9HAW0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 FAM86LP-201ENST00000478302 853 ntBASIC14.7□□□□□ -0.06
BRF2Q9HAW0 RPL13AP25-201ENST00000484130 612 ntBASIC14.7□□□□□ -0.06
BRF2Q9HAW0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 AC104794.3-201ENST00000566840 1248 ntBASIC14.7□□□□□ -0.06
BRF2Q9HAW0 RRP7BP-205ENST00000566851 833 ntBASIC14.7□□□□□ -0.06
BRF2Q9HAW0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 AC106028.4-201ENST00000614509 607 ntBASIC14.7□□□□□ -0.06
BRF2Q9HAW0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 LILRP1-201ENST00000444199 1370 ntBASIC14.7□□□□□ -0.06
BRF2Q9HAW0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRF2Q9HAW0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 AL360270.3-201ENST00000609118 1348 ntBASIC14.69□□□□□ -0.06
BRF2Q9HAW0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 AC106881.1-201ENST00000605849 3329 ntBASIC14.69□□□□□ -0.06
BRF2Q9HAW0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 RN7SL399P-201ENST00000471648 279 ntBASIC14.69□□□□□ -0.06
BRF2Q9HAW0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 AC026410.3-201ENST00000514280 936 ntBASIC14.69□□□□□ -0.06
BRF2Q9HAW0 DOC2GP-202ENST00000514950 1163 ntBASIC14.69□□□□□ -0.06
BRF2Q9HAW0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.69□□□□□ -0.06
BRF2Q9HAW0 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.69□□□□□ -0.06
BRF2Q9HAW0 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.69□□□□□ -0.06
BRF2Q9HAW0 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.69□□□□□ -0.06
BRF2Q9HAW0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRF2Q9HAW0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms