Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AC091812.2-201ENST00000619081 385 ntBASIC14.79□□□□□ -0.04
PIF1Q9H611 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.79□□□□□ -0.04
PIF1Q9H611 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
PIF1Q9H611 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.79□□□□□ -0.04
PIF1Q9H611 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.79□□□□□ -0.04
PIF1Q9H611 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PIF1Q9H611 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.78□□□□□ -0.04
PIF1Q9H611 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.78□□□□□ -0.04
PIF1Q9H611 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.78□□□□□ -0.04
PIF1Q9H611 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.78□□□□□ -0.04
PIF1Q9H611 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.78□□□□□ -0.04
PIF1Q9H611 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.78□□□□□ -0.04
PIF1Q9H611 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.78□□□□□ -0.04
PIF1Q9H611 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PIF1Q9H611 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.78□□□□□ -0.04
PIF1Q9H611 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PIF1Q9H611 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
PIF1Q9H611 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.78□□□□□ -0.04
PIF1Q9H611 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.78□□□□□ -0.04
PIF1Q9H611 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.78□□□□□ -0.04
PIF1Q9H611 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.78□□□□□ -0.04
PIF1Q9H611 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.78□□□□□ -0.04
PIF1Q9H611 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.78□□□□□ -0.04
PIF1Q9H611 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
PIF1Q9H611 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PIF1Q9H611 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.78□□□□□ -0.04
PIF1Q9H611 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.78□□□□□ -0.04
PIF1Q9H611 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
PIF1Q9H611 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PIF1Q9H611 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.77□□□□□ -0.04
PIF1Q9H611 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.77□□□□□ -0.04
PIF1Q9H611 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PIF1Q9H611 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
PIF1Q9H611 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
PIF1Q9H611 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PIF1Q9H611 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PIF1Q9H611 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PIF1Q9H611 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.77□□□□□ -0.04
PIF1Q9H611 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.77□□□□□ -0.04
PIF1Q9H611 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PIF1Q9H611 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.77□□□□□ -0.04
PIF1Q9H611 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.77□□□□□ -0.04
PIF1Q9H611 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIF1Q9H611 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIF1Q9H611 AC023274.1-201ENST00000418278 595 ntBASIC14.77□□□□□ -0.05
PIF1Q9H611 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.77□□□□□ -0.05
PIF1Q9H611 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
PIF1Q9H611 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.77□□□□□ -0.05
PIF1Q9H611 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.77□□□□□ -0.05
PIF1Q9H611 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.77□□□□□ -0.05
PIF1Q9H611 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIF1Q9H611 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIF1Q9H611 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
PIF1Q9H611 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.77□□□□□ -0.05
PIF1Q9H611 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIF1Q9H611 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIF1Q9H611 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIF1Q9H611 MTHFR-210ENST00000641407 2387 ntBASIC14.77□□□□□ -0.05
PIF1Q9H611 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIF1Q9H611 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PIF1Q9H611 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIF1Q9H611 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PIF1Q9H611 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIF1Q9H611 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PIF1Q9H611 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.77□□□□□ -0.05
PIF1Q9H611 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PIF1Q9H611 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
PIF1Q9H611 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.77□□□□□ -0.05
PIF1Q9H611 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.76□□□□□ -0.05
PIF1Q9H611 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PIF1Q9H611 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms