Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC68Q9H2F9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 AC015922.1-201ENST00000421102 1152 ntBASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 AC010336.2-201ENST00000564226 506 ntBASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 AC139530.3-201ENST00000620344 690 ntBASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 AL109936.8-201ENST00000641772 604 ntBASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CCDC68Q9H2F9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 AC087499.5-201ENST00000452760 1342 ntBASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 KRT18P28-201ENST00000453838 1332 ntBASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 AL133267.1-201ENST00000398220 340 ntBASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 MIR943-201ENST00000401286 94 ntBASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 AC074338.1-201ENST00000416825 156 ntBASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 TREML5P-201ENST00000421694 576 ntBASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 AC015910.1-201ENST00000579400 975 ntBASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC68Q9H2F9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CCDC68Q9H2F9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CCDC68Q9H2F9 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC68Q9H2F9 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC68Q9H2F9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC68Q9H2F9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC68Q9H2F9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC68Q9H2F9 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms