Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 AC087163.2-201ENST00000457299 853 ntBASIC12.52□□□□□ -0.41
NKX6-2Q9C056 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 AP005901.3-202ENST00000581653 237 ntBASIC12.52□□□□□ -0.41
NKX6-2Q9C056 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 AL139424.1-201ENST00000607572 797 ntBASIC12.52□□□□□ -0.41
NKX6-2Q9C056 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 AL589182.2-201ENST00000619332 1049 ntBASIC12.52□□□□□ -0.41
NKX6-2Q9C056 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NKX6-2Q9C056 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 PCDHB18P-202ENST00000526308 3197 ntBASIC12.51□□□□□ -0.41
NKX6-2Q9C056 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 AC068760.1-201ENST00000493579 1953 ntBASIC12.51□□□□□ -0.41
NKX6-2Q9C056 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 AC245100.5-201ENST00000452108 331 ntBASIC12.51□□□□□ -0.41
NKX6-2Q9C056 AC091607.1-201ENST00000490318 1060 ntBASIC12.51□□□□□ -0.41
NKX6-2Q9C056 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 AL136038.3-201ENST00000561909 1096 ntBASIC12.51□□□□□ -0.41
NKX6-2Q9C056 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 BNIP3P18-201ENST00000593976 575 ntBASIC12.51□□□□□ -0.41
NKX6-2Q9C056 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
NKX6-2Q9C056 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX6-2Q9C056 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms