Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CCL13Q99616 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
CCL13Q99616 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
CCL13Q99616 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.35
CCL13Q99616 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.89□□□□□ -0.35
CCL13Q99616 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.89□□□□□ -0.35
CCL13Q99616 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.89□□□□□ -0.35
CCL13Q99616 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.89□□□□□ -0.35
CCL13Q99616 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CCL13Q99616 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 AC126365.1-201ENST00000578585 1514 ntBASIC12.89□□□□□ -0.35
CCL13Q99616 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.89□□□□□ -0.35
CCL13Q99616 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CCL13Q99616 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.89□□□□□ -0.35
CCL13Q99616 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.89□□□□□ -0.35
CCL13Q99616 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.89□□□□□ -0.35
CCL13Q99616 AP005018.1-201ENST00000525475 301 ntBASIC12.89□□□□□ -0.35
CCL13Q99616 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.89□□□□□ -0.35
CCL13Q99616 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.89□□□□□ -0.35
CCL13Q99616 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.89□□□□□ -0.35
CCL13Q99616 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.89□□□□□ -0.35
CCL13Q99616 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.89□□□□□ -0.35
CCL13Q99616 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.89□□□□□ -0.35
CCL13Q99616 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.89□□□□□ -0.35
CCL13Q99616 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.89□□□□□ -0.35
CCL13Q99616 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.89□□□□□ -0.35
CCL13Q99616 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCL13Q99616 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CCL13Q99616 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CCL13Q99616 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CCL13Q99616 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CCL13Q99616 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CCL13Q99616 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.88□□□□□ -0.35
CCL13Q99616 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
CCL13Q99616 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.88□□□□□ -0.35
CCL13Q99616 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.88□□□□□ -0.35
CCL13Q99616 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CCL13Q99616 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CCL13Q99616 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CCL13Q99616 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
CCL13Q99616 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.88□□□□□ -0.35
CCL13Q99616 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 AP006294.1-201ENST00000415407 339 ntBASIC12.88□□□□□ -0.35
CCL13Q99616 SOCS2P1-201ENST00000417727 557 ntBASIC12.88□□□□□ -0.35
CCL13Q99616 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.88□□□□□ -0.35
CCL13Q99616 COX20P2-201ENST00000452636 358 ntBASIC12.88□□□□□ -0.35
CCL13Q99616 RN7SL692P-201ENST00000464677 288 ntBASIC12.88□□□□□ -0.35
CCL13Q99616 GAPDHP40-201ENST00000505218 1006 ntBASIC12.88□□□□□ -0.35
CCL13Q99616 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.88□□□□□ -0.35
CCL13Q99616 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.88□□□□□ -0.35
CCL13Q99616 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.88□□□□□ -0.35
CCL13Q99616 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.88□□□□□ -0.35
CCL13Q99616 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.88□□□□□ -0.35
CCL13Q99616 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.88□□□□□ -0.35
CCL13Q99616 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.88□□□□□ -0.35
CCL13Q99616 AC093813.1-201ENST00000605066 256 ntBASIC12.88□□□□□ -0.35
CCL13Q99616 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms