Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.75□□□□□ -0.37
S1PR3Q99500 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.75□□□□□ -0.37
S1PR3Q99500 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.75□□□□□ -0.37
S1PR3Q99500 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
S1PR3Q99500 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.75□□□□□ -0.37
S1PR3Q99500 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
S1PR3Q99500 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
S1PR3Q99500 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
S1PR3Q99500 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.75□□□□□ -0.37
S1PR3Q99500 TREML5P-201ENST00000421694 576 ntBASIC12.75□□□□□ -0.37
S1PR3Q99500 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.75□□□□□ -0.37
S1PR3Q99500 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
S1PR3Q99500 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.75□□□□□ -0.37
S1PR3Q99500 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.75□□□□□ -0.37
S1PR3Q99500 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
S1PR3Q99500 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.75□□□□□ -0.37
S1PR3Q99500 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.75□□□□□ -0.37
S1PR3Q99500 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 AC027369.6-201ENST00000525520 931 ntBASIC12.75□□□□□ -0.37
S1PR3Q99500 RFPL4AP1-201ENST00000530883 850 ntBASIC12.75□□□□□ -0.37
S1PR3Q99500 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.75□□□□□ -0.37
S1PR3Q99500 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.75□□□□□ -0.37
S1PR3Q99500 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
S1PR3Q99500 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.75□□□□□ -0.37
S1PR3Q99500 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.75□□□□□ -0.37
S1PR3Q99500 DUX4L27-201ENST00000554796 1261 ntBASIC12.75□□□□□ -0.37
S1PR3Q99500 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 Z97205.2-201ENST00000564697 1639 ntBASIC12.75□□□□□ -0.37
S1PR3Q99500 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.75□□□□□ -0.37
S1PR3Q99500 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.75□□□□□ -0.37
S1PR3Q99500 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.75□□□□□ -0.37
S1PR3Q99500 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.75□□□□□ -0.37
S1PR3Q99500 AL158211.3-201ENST00000607385 239 ntBASIC12.75□□□□□ -0.37
S1PR3Q99500 AL138828.2-201ENST00000615812 383 ntBASIC12.75□□□□□ -0.37
S1PR3Q99500 AC093512.1-201ENST00000617969 520 ntBASIC12.75□□□□□ -0.37
S1PR3Q99500 SPDYE12P-201ENST00000618416 771 ntBASIC12.75□□□□□ -0.37
S1PR3Q99500 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.75□□□□□ -0.37
S1PR3Q99500 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.75□□□□□ -0.37
S1PR3Q99500 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
S1PR3Q99500 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
S1PR3Q99500 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.75□□□□□ -0.37
S1PR3Q99500 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
S1PR3Q99500 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
S1PR3Q99500 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.75□□□□□ -0.37
S1PR3Q99500 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.74□□□□□ -0.37
S1PR3Q99500 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.74□□□□□ -0.37
S1PR3Q99500 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.74□□□□□ -0.37
S1PR3Q99500 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.74□□□□□ -0.37
S1PR3Q99500 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 AL133267.1-201ENST00000398220 340 ntBASIC12.74□□□□□ -0.37
S1PR3Q99500 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.74□□□□□ -0.37
S1PR3Q99500 RPL37AP1-201ENST00000412502 279 ntBASIC12.74□□□□□ -0.37
S1PR3Q99500 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.74□□□□□ -0.37
S1PR3Q99500 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
S1PR3Q99500 AC097493.3-201ENST00000509725 367 ntBASIC12.74□□□□□ -0.37
S1PR3Q99500 IGHV3-42-201ENST00000520410 361 ntBASIC12.74□□□□□ -0.37
S1PR3Q99500 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.74□□□□□ -0.37
S1PR3Q99500 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms