Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 AL607033.1-201ENST00000623900 1599 ntBASIC12.53□□□□□ -0.4
RAB40CQ96S21 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 FAM220BP-201ENST00000377689 816 ntBASIC12.53□□□□□ -0.4
RAB40CQ96S21 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 AC009947.1-201ENST00000444350 727 ntBASIC12.53□□□□□ -0.4
RAB40CQ96S21 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.53□□□□□ -0.4
RAB40CQ96S21 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 AL928921.2-201ENST00000641325 2442 ntBASIC12.53□□□□□ -0.4
RAB40CQ96S21 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 AP000845.1-201ENST00000581677 2131 ntBASIC12.53□□□□□ -0.4
RAB40CQ96S21 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB40CQ96S21 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB40CQ96S21 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.4
RAB40CQ96S21 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.52□□□□□ -0.4
RAB40CQ96S21 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB40CQ96S21 C8orf49-201ENST00000525043 1968 ntBASIC12.52□□□□□ -0.4
RAB40CQ96S21 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
RAB40CQ96S21 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB40CQ96S21 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
RAB40CQ96S21 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
RAB40CQ96S21 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB40CQ96S21 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
RAB40CQ96S21 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RAB40CQ96S21 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB40CQ96S21 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RAB40CQ96S21 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.52□□□□□ -0.41
RAB40CQ96S21 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 AC002056.1-201ENST00000395613 760 ntBASIC12.52□□□□□ -0.41
RAB40CQ96S21 AL590627.1-203ENST00000421194 1026 ntBASIC12.52□□□□□ -0.41
RAB40CQ96S21 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 RPL13AP23-201ENST00000480739 586 ntBASIC12.52□□□□□ -0.41
RAB40CQ96S21 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 AL138918.1-201ENST00000568306 659 ntBASIC12.52□□□□□ -0.41
RAB40CQ96S21 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 Z83851.2-201ENST00000609564 659 ntBASIC12.52□□□□□ -0.41
RAB40CQ96S21 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms